EH668986
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_EUCGG (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.602e-21 Identity = 52/70 (74.29%), Postives = 52/70 (74.29%), Query Frame = 3
Query: 21 GFENKLLLRRIDGAIQVRSNVDPTFYSLVXXXXXXXXXXXXXXXXNPYIPYQCMDSYLSSTGLGSASMGK 230
GFE K LLRRIDGAIQVRSNVDPTFYSLV NPYIPYQCMDSYLSSTGLGSASMGK
Sbjct: 44 GFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQCMDSYLSSTGLGSASMGK 113
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSJ (Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.028e-15 Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 3
Query: 6 SCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 107
SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV
Sbjct: 5 SCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 51.2174 bits (121), Expect = 1.028e-15 Identity = 25/28 (89.29%), Postives = 25/28 (89.29%), Query Frame = 1
Query: 145 LFSIIHTSLISVWTAISRAQV*VRPQWE 228
LFS IHTSLISVW AISRAQV VRPQWE
Sbjct: 52 LFSRIHTSLISVWRAISRAQVEVRPQWE 79
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSI (Uncharacterized protein ycf68 OS=Oryza sativa subsp. indica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.028e-15 Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 3
Query: 6 SCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 107
SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV
Sbjct: 5 SCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 51.2174 bits (121), Expect = 1.028e-15 Identity = 25/28 (89.29%), Postives = 25/28 (89.29%), Query Frame = 1
Query: 145 LFSIIHTSLISVWTAISRAQV*VRPQWE 228
LFS IHTSLISVW AISRAQV VRPQWE
Sbjct: 52 LFSRIHTSLISVWRAISRAQVEVRPQWE 79
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSA (Uncharacterized protein ycf68 OS=Oryza sativa GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.028e-15 Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 3
Query: 6 SCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 107
SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV
Sbjct: 5 SCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 51.2174 bits (121), Expect = 1.028e-15 Identity = 25/28 (89.29%), Postives = 25/28 (89.29%), Query Frame = 1
Query: 145 LFSIIHTSLISVWTAISRAQV*VRPQWE 228
LFS IHTSLISVW AISRAQV VRPQWE
Sbjct: 52 LFSRIHTSLISVWRAISRAQVEVRPQWE 79
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_ORYNI (Uncharacterized protein ycf68 OS=Oryza nivara GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.028e-15 Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 3
Query: 6 SCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 107
SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV
Sbjct: 5 SCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 51.2174 bits (121), Expect = 1.028e-15 Identity = 25/28 (89.29%), Postives = 25/28 (89.29%), Query Frame = 1
Query: 145 LFSIIHTSLISVWTAISRAQV*VRPQWE 228
LFS IHTSLISVW AISRAQV VRPQWE
Sbjct: 52 LFSRIHTSLISVWRAISRAQVEVRPQWE 79
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_SACOF (Uncharacterized protein ycf68 OS=Saccharum officinarum GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.715e-15 Identity = 54/111 (48.65%), Postives = 59/111 (53.15%), Query Frame = 3
Query: 6 SCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLVXXXXXXXXXXXXXXXXNPYIPYQCMDSYLSSTGLGSASMGKKMEHLTTYLHRPRTTRSPLSFHSGVTEGSYLPGRP 335
SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV P L G KMEHLTT+LHRPRTTRSPLSF +G +P P
Sbjct: 5 SCLNRSLKPNKLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNG-KMEHLTTHLHRPRTTRSPLSFWG---DGGIVPFEP 111
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_SACHY (Uncharacterized protein ycf68 OS=Saccharum hybrid GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.715e-15 Identity = 54/111 (48.65%), Postives = 59/111 (53.15%), Query Frame = 3
Query: 6 SCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLVXXXXXXXXXXXXXXXXNPYIPYQCMDSYLSSTGLGSASMGKKMEHLTTYLHRPRTTRSPLSFHSGVTEGSYLPGRP 335
SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV P L G KMEHLTT+LHRPRTTRSPLSF +G +P P
Sbjct: 5 SCLNRSLKPNKLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNG-KMEHLTTHLHRPRTTRSPLSFWG---DGGIVPFEP 111
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_MAIZE (Uncharacterized protein ycf68 OS=Zea mays GN=ycf68 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.715e-15 Identity = 54/111 (48.65%), Postives = 59/111 (53.15%), Query Frame = 3
Query: 6 SCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLVXXXXXXXXXXXXXXXXNPYIPYQCMDSYLSSTGLGSASMGKKMEHLTTYLHRPRTTRSPLSFHSGVTEGSYLPGRP 335
SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV P L G KMEHLTT+LHRPRTTRSPLSF +G +P P
Sbjct: 5 SCLNRSLKPNKLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGGGPPGLLSSRESIHPLSVYGELSLEHRLRFVLNG-KMEHLTTHLHRPRTTRSPLSFWG---DGGIVPFEP 111
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_PINTH (Uncharacterized protein ycf68 OS=Pinus thunbergii GN=ycf68 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.101e-13 Identity = 38/65 (58.46%), Postives = 40/65 (61.54%), Query Frame = 3
Query: 21 GFENKLLLRRIDGAIQVRSNVDPTFYSLV---XXXXXXXXXXXXXXXXNPYIPYQCMDSYLSSTG 206
GF +L+LRRIDGAIQVRSN DPTFYS V NPYIPYQCMD YLS TG
Sbjct: 11 GFGTELILRRIDGAIQVRSNTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPYQCMDGYLSGTG 75
BLAST of EH668986 vs. ExPASy Swiss-Prot
Match: YCF68_PINKO (Uncharacterized protein ycf68 OS=Pinus koraiensis GN=ycf68 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.101e-13 Identity = 38/65 (58.46%), Postives = 40/65 (61.54%), Query Frame = 3
Query: 21 GFENKLLLRRIDGAIQVRSNVDPTFYSLV---XXXXXXXXXXXXXXXXNPYIPYQCMDSYLSSTG 206
GF +L+LRRIDGAIQVRSN DPTFYS V NPYIPYQCMD YLS TG
Sbjct: 11 GFGTELILRRIDGAIQVRSNADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPYQCMDGYLSGTG 75 The following BLAST results are available for this feature:
BLAST of EH668986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EH668986 ID=EH668986; Name=EH668986; organism=Citrus sinensis; type=EST; length=339bpback to top |