EY665456

Overview
NameEY665456
Unique NameEY665456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.685e-61
Identity = 119/162 (73.46%), Postives = 129/162 (79.63%), Query Frame = 1
Query:  124 AVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            AVSAAV               IIS D+I F KVP YY++VS G R+VS+RAQVTTEAPAKVEK SKK +EGVIVNKF PK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIGVIADGVD N KPHKL+LY  A SALGDFGDSKT SL  K+
Sbjct:    4 AVSAAVSLPSSKSTSFSSRTSIISTDKINFNKVPLYYRNVSGGSRLVSIRAQVTTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIADGVDANGKPHKLRLYSTASSALGDFGDSKTVSLCVKR 165          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.394e-54
Identity = 105/163 (64.42%), Postives = 125/163 (76.69%), Query Frame = 1
Query:  121 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            AAV+AAV               I++P+R+ F+KV     +VS  GRV ++RAQVTTEAPAKV K SKK +E ++VNKF PK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIG++ DG+D N KPHKL+LY IA SA+GDFGDSKT SL  K+
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NNVSISGRVGTIRAQVTTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKR 163          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.084e-54
Identity = 100/147 (68.03%), Postives = 122/147 (82.99%), Query Frame = 1
Query:  187 IISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTE------APAKVEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            +ISPD+I+++KVP YY++VS  G++  +RAQ+ ++      APAKVEK SKKMEEG+ VNKF PKTPY+GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI DG D N KPHKL+LY IA SALGDFGD+K+ SL  K+
Sbjct:   26 VISPDKISYKKVPLYYRNVSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKR 172          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.521e-52
Identity = 103/166 (62.05%), Postives = 124/166 (74.70%), Query Frame = 1
Query:  121 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPA---KVEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            AAV+AAV               I++P+R+ F+KV      VS  GRV ++RAQ+TTEA A   KV K SKK +EG++VNKF PK PY+GRCLLNTKITGDDAPGETWHMVF+TEGEVPY+EGQSIG++ DG+D N KPHKL+LY IA SA+GDFGDSKT SL  K+
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFTTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKR 166          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.236e-51
Identity = 99/143 (69.23%), Postives = 117/143 (81.82%), Query Frame = 1
Query:  187 IISPDRITFRKVPFYYKDVSTGGRVVSVRAQVT-TEAP-AKVEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            +I+ ++I F KVP YY++VS GG+V ++RA  +  EAP AKVEK SKKMEEGVIVNK+ PK PY GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI +G+D N KPHKL+LY IA   LGDFGDSKT SL  K+
Sbjct:   26 VITHEKINFNKVPLYYRNVSVGGKVGTIRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPEGIDKNGKPHKLRLYSIASRPLGDFGDSKTVSLCVKR 168          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.319e-49
Identity = 103/167 (61.68%), Postives = 119/167 (71.26%), Query Frame = 1
Query:  121 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEA----PAKVEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            AA+SAAV                +SP RI  +K    Y+      RVVSV+AQVTT+     P KV KESKK EEG++VNKF PK PY GRCLLNTKITGDDAPGETWH+VF+TEGEVPY+EGQSIGVI +G+D N KPHKL+LY IA SA+GDFGDSKT SL  K+
Sbjct:    3 AAISAAVSLPSSKSSSLLTKISSVSPQRIFLKKSTVCYR------RVVSVKAQVTTDTTEAPPVKVVKESKKQEEGIVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHIVFTTEGEVPYREGQSIGVIPEGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKR 163          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.712e-48
Identity = 98/147 (66.67%), Postives = 117/147 (79.59%), Query Frame = 1
Query:  190 ISPDRITFRKVPFYYK--DVSTGGRVVSVRAQVTTEA----PAK-VEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            I+P+RI F K  FYYK  +V TG RV S++AQ+TTE     PAK VEK SKK EEGVIVN++ PK PY G+CLLNTKIT DDAPGETWHMVFS +GE+PY+EGQS+GVIADG+D N KPHK++LY IA SALGD G+S+T SL  K+
Sbjct:   26 IAPERIRFTKGAFYYKSNNVVTGKRVFSIKAQITTETDTPTPAKKVEKVSKKNEEGVIVNRYRPKEPYTGKCLLNTKITADDAPGETWHMVFSHQGEIPYREGQSVGVIADGIDKNGKPHKVRLYSIASSALGDLGNSETVSLCVKR 172          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.536e-44
Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = 1
Query:  256 RVVSVRAQVTTE-------APAKVEKESKKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            R + +RAQV+T        APAK EK SKK +EGV+ NK+ PK PY+G+CLLNTKIT DDAPGETWHMVFSTEGE+PY+EGQSIGVIADGVD N KPHKL+LY IA SALGDFGDSKT SL  K+
Sbjct:   41 RGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKR 165          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR_CYAPA (Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.875e-25
Identity = 56/120 (46.67%), Postives = 77/120 (64.17%), Query Frame = 1
Query:  256 RVVSVRAQVTTEAPAKVEKES--KKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSLRGKK 609
            + VS +   T E    +  ++   K +  + +N F P  PYIG+C+ N +I G+ APGET H++F+ EG+VPY EGQSIG+I  G D + KPHKL+LY IA +  GDFGD KT SL  K+
Sbjct:   47 QAVSAKPATTFEVDTTIRAQAVDAKKKGDIPLNLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVPYLEGQSIGIIPPGTDKDGKPHKLRLYSIASTRHGDFGDDKTVSLSVKR 166          
BLAST of EY665456 vs. ExPASy Swiss-Prot
Match: FENR_SYNP2 (Ferredoxin--NADP reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18
Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  250 GGRVVSVR-----AQVTTEAPAKVEKES-------------KKMEEGVIVNKFTPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDPNAKPHKLKLYFIAYSALGDFGDSKTGSL 597
            GG++VS+R     AQ+ +E  +  +  +             K  +  V VN + PKTP++G+C+ N ++  +   G   H+ F  +EG++ Y EGQSIG+I  G D N KPHKL+LY IA +  GD  D+KT SL
Sbjct:   65 GGKIVSIRPAEDAAQIVSEGQSSAQASAQSPMASSTKIVHPKTTDTSVPVNIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSL 199          
The following BLAST results are available for this feature:
BLAST of EY665456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
FENR1_TOBAC7.685e-6173.46Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
FENR1_PEA2.394e-5464.42Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_SPIOL4.084e-5468.03Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR_VICFA6.521e-5262.05Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FENR_MESCR3.236e-5169.23Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FNRL1_ARATH2.319e-4961.68Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FNRL2_ARATH5.712e-4866.67Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR1_ORYSJ8.536e-4471.20Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_CYAPA8.875e-2546.67Ferredoxin--NADP reductase, cyanelle OS=Cyanophora... [more]
FENR_SYNP26.160e-1837.78Ferredoxin--NADP reductase OS=Synechococcus sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665456 ID=EY665456; Name=EY665456; organism=Citrus sinensis; type=EST; length=885bp
GGGAACGGCGGTACGGGCCGGATTCCCGGGTCGACCCCGCGTCCGTTAAA
ACGTCAACACCCCCCCCTTTTTTCTTCTCTCTTCATCTAAATTCTTCTTT
ATCATCACTTATCAATCATGGCTGCAGTGAGTGCTGCAGTTTCTCTTCCG
ACTTCCAAGTCCACTTCGCTTCCAACCAGAACCTCTATCATCTCTCCTGA
CAGAATCACCTTCAGAAAGGTTCCATTTTACTACAAAGATGTTTCAACTG
GAGGGAGAGTGGTTTCTGTCAGAGCTCAGGTTACCACTGAGGCTCCTGCT
AAGGTTGAGAAAGAGTCCAAGAAAATGGAGGAAGGTGTTATTGTTAACAA
GTTCACACCTAAGACACCTTACATTGGCAGATGCCTTTTAAACACTAAGA
TCACTGGTGATGATGCTCCTGGAGAGACCTGGCACATGGTCTTCAGCACT
GAAGGAGAGGTTCCCTACAAAGAAGGGCAATCAATTGGGGTGATTGCAGA
TGGTGTTGACCCGAATGCGAAGCCTCACAAACTGAAATTATACTTCATTG
CTTACAGTGCCCTTGGGGACTTTGGAGACTCCAAAACTGGTTCCTTAAGG
GGGAAAAAGGGTTGGTGACCCCCAAACGAAAAAGGGAGAAATTTGGTCAG
GGAGGCTGCTCCAATTCCTTGTGGTGAATTAAACCCTGGGGGCTGAAGAG
GAAAATTACAGGGAACTGGTGGGGAAAAAAAAGGTCATTGCACAGGGAAT
TCCCATGGCTACACAACATTATGGCTTGGAAACGGGAAACCGGAAACCGC
TCTCCCTTTCCCGGGATTTTTTGGGAAAAATGGTTTTTTTAAAAAACCGA
AAAAAAAACCAAAGCAATAGGGGGTTTGGGTGGTG
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