EY665441

Overview
NameEY665441
Unique NameEY665441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665441 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.484e-21
Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 3 
Query:  111 MLGVFSSAIVSPPEELVA--AGSRTPSPKTTSTALVDRFLPANSSAVSVQVGDNVTLAYTHQNESPLRQRSFAAKDEIFCLFEGALDNLGSLTQQYGLAKSANEVILVIEAYKALRDRA 461
            ML VF  +I  PP EL    AG +    KT    + + F      +    + +   +A++H NE+PL+ RS    D++FC+F GALDN   L + YGL++ A E ++++EAYK LRDRA
Sbjct:    1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREE-IAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRA 118

HSP 2 Score: 36.1946 bits (82), Expect = 7.484e-21
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1 
Query:  469 PPNHVVGHLSGYFAFIVYDKSTSTLFVA 552
            PP+ V+  L G FAFI++D   STLF+A
Sbjct:  121 PPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of EY665441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC7.484e-2138.66Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665441 ID=EY665441; Name=EY665441; organism=Citrus sinensis; type=EST; length=828bp
TGAACTTTCACGTTAAAGCCCCTTTGTTCCGAACGGATCAAAGTTTTCTT
GTATGAGAGAGACCTTTCTAGGGCGAGAAAGCGAGAGAAAAGGAAATTTG
GTAGCTTAAAATGTTGGGAGTGTTCAGCAGCGCGATCGTTTCACCTCCAG
AGGAGCTGGTGGCGGCCGGAAGCCGGACTCCGTCGCCGAAGACCACATCG
ACGGCACTGGTCGACCGTTTCCTCCCGGCCAACTCGTCTGCTGTGTCCGT
ACAGGTCGGGGACAACGTCACCCTCGCGTACACTCATCAGAACGAGTCTC
CTTTACGGCAAAGATCATTTGCTGCGAAAGATGAGATCTTCTGCTTGTTT
GAGGGAGCACTTGATAACTTGGGAAGCCTGACGCAGCAATATGGACTAGC
TAAGTCGGCAAATGAAGTGATCTTGGTGATTGAGGCATACAAGGCTCTGC
GTGATCGGGCCCCTTACCCCCCCGAACCATGTCGTTGGCCACCTTAGTGG
GTACTTTGCCTTCATTGTCTACGACAAGTCCACCTCCACCTTGTTTGTGG
CTTCTGACCAATTTGGCTAAGGTTCCTTCTTTATTTGAGGAATCACTGCC
TGAATGGACATGGTTCCCTTTGTTGATGATGCTGACTTGCTCAAACGGGC
TTTGCGCAAGTCCTTTGCCTTCTTTCCCCCAAGAGTGTTCCCTCTTCCCA
GCAGGTGGGAGGACCGATAACTTTTTCAAAATTCAAAAAAACAATAATCC
CTTGCGTTCCCGGCTGCCGAAAAAAAAAACTTTGGGGTGCTCCTTTTTAA
GGGGTGAAAGGCCCCCAATTTCTTTTTA
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