CX043266

Overview
NameCX043266
Unique NameCX043266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13203 contig Csv1_Contig13203:65..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.092e-86
Identity = 141/239 (59.00%), Postives = 192/239 (80.33%), Query Frame = -1
Query:  176 MKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 892
            +KAGE   +DLLG+L+E++ +EI++ GN K+ G S+NDVIEECKLFYFAGQETT VLL WT +LLSKH +WQERAR+EVLQ FG NKP+++ LNHLK V MILYEVLRLYPPV  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG+DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNFAL++AK+   MILQ + F+++PSYVHAP  + T+ P+ G+ +I +KL
Sbjct:  284 LKAGEPGEDDLLGVLLESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.265e-30
Identity = 71/204 (34.80%), Postives = 120/204 (58.82%), Query Frame = -1
Query:  260 DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 865
            DLL +++ + + +E++ H +  N      +++ +  +F FAG ETTS  L+     L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LRLYP    L RA  K+ ++  + +P G  + +P+ ++H+DP+LW  +  EF+PERF++   K   N  +Y PF  GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  270 DLLQLMINSQNSKEMDPHKSLSN-----EELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29
Identity = 64/178 (35.96%), Postives = 111/178 (62.36%), Query Frame = -1
Query:  260 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 790
            S ++V+ +C LF   G +TT++ L++   LL+ +   QE+  +E+ + FG ++ +++ L  LK +  ++ E LRLYP  ++  SR  +K T +  + + AGV + +    +H DPELWG+D  EFKPER++    +  +++ +Y PF LGPR C+G   A++E K+  T +L+NY+FE
Sbjct:  309 SADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAREFGTSEVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29
Identity = 71/222 (31.98%), Postives = 118/222 (53.15%), Query Frame = -1
Query:  260 MKAGEAANNDLLGILMETSFREIEEHGNNK----------NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 892
            ++ GE A  D + + ++    ++E  G N           N   +  +++ +C +F  AG +TT++ L++   LL+ H + Q++ ++EV +   N +   D L+ LK ++ +  E LRLYP      SR  ++ TKLGN+ +  G  I +    +H DP +WGDDA +FKPER+    S     +  Y PF LGPR C+G   A +E K+    IL+ ++FE
Sbjct:  270 IEIGEPA--DFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFE 489          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.064e-29
Identity = 68/212 (32.08%), Postives = 125/212 (58.96%), Query Frame = -1
Query:  260 MKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 892
            +K  +    D L +++ +  +  +E  N+K    S  +++ +  +F FAG ETTS  L++ + +L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  261 LKDNQKPRVDFLQLMINS--QNSKETDNHK--ALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLW-PEPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.064e-29
Identity = 71/202 (35.15%), Postives = 122/202 (60.40%), Query Frame = -1
Query:  242 ETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYV 844
            E  F + E    +K++ F  +++I +  +F  AG +TT++ L+++  LL+ H + Q++ ++EV +   + +  +D L+ LK ++ ++ E LRLYP  +++ +R  LK T +  + + AG  I +    +H DP++WGDD  EFKPER+  G  +    +  Y PF +GPRIC+G   A++E KM  T IL+NY+FE +P  V
Sbjct:  296 EQDFAKSEVLKVDKHLTF--DEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.338e-28
Identity = 68/194 (35.05%), Postives = 110/194 (56.70%), Query Frame = -1
Query:  257 FREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFEL 835
            F +   +GN +    +  +++ +C +F  AG +TT++ L++T  LL+ H + Q++ ++E+ +        +D L+ LK +  I+ E LRLYP  TM  SR  ++ TKLGN+ +  G  + +    +H D ++WGDDA EFKPER+ +        +  Y  F LGPR CVG   A +E KM    IL+ Y+FE+
Sbjct:  300 FSKTSSYGNRQ---LTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEV 490          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 67/204 (32.84%), Postives = 120/204 (58.82%), Query Frame = -1
Query:  260 DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 865
            DLL +++ + + +EI+ H    ++     +++ +  +F F G ETTS  L++ +  L+ H   Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +T+P G  + +P+ ++H +PELW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A   ILQN+SF+
Sbjct:  270 DLLQLMINSQNSKEIDNHKALSDI-----ELVAQSTIFIFGGYETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELW-PEPEEFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 64/175 (36.57%), Postives = 103/175 (58.86%), Query Frame = -1
Query:  260 DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 781
            +++ +  +F FAG ETTS  L++ M  L+ H D Q++ ++E+   F N   P YD L  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P   +H+D  LW  +  EF+PERF+   +K + N  +Y PF  GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  294 ELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLW-PEPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.084e-28
Identity = 68/194 (35.05%), Postives = 110/194 (56.70%), Query Frame = -1
Query:  260 IEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 826
            +  H N+K+       S  ++  +  +F FAG ETTS  L++T+  L+ H D Q++ + E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W +   EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A T I+QN+SF+
Sbjct:  276 MNSHNNSKDKVSHKALSDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPE-EFQPERFSKE-NKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
The following BLAST results are available for this feature:
BLAST of CX043266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C72A1_CATRO4.092e-8659.00Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP3AT_PIG9.265e-3034.80Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C13A2_CAEEL1.580e-2935.96Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
C13A1_CAEEL1.580e-2931.98Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
CP3AO_SHEEP2.064e-2932.08Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
C13A7_CAEEL2.064e-2935.15Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
C13AA_CAEEL1.338e-2835.05Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP3AS_BOVIN2.282e-2832.84Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3AC_CANFA2.282e-2836.57Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP3AB_MOUSE5.084e-2835.05Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_10A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043266 ID=CX043266; Name=CX043266; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTAGCACCAAATATTGTACAATATTATTATAATACAGTACTAAT
GCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAATACATT
AAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTTATAGTT
GCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAATTGGGTA
CCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGA
TGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGGCCATTT
TTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAAT
GCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAATTCCTTC
CGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAG
GATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGT
AATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCAT
AGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCTGGACAA
TTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCAAACACT
TGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAA
TAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAA
AGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACA
TTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAG
TATGCCTAACAAGTCATTATTCGCAGCTTCCCCTGCTTTCAT
back to top