CV884664

Overview
NameCV884664
Unique NameCV884664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4121 contig Csv1_Contig4121:79..838. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CV884664 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.183e-32
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1 
Query:  367 LNLDAAFEQKNEIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNXXXXXXXXXXXXXXXXXXXXXLQIKRAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTSKDVMDMVLVTQY 759
            +NLD  FEQK E+AK+V EELEK M  YGY I   L+VDI PD  V+RAMN                     LQ+KRAE EAEAKYL G+G+ARQRQAI DGLR+++L FS  V GT++K+VMD++++TQY
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQY 131
The following BLAST results are available for this feature:
BLAST of CV884664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO1.183e-3254.20Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008G11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884664 ID=CV884664; Name=CV884664; organism=Citrus sinensis; type=EST; length=760bp
AAGCAACTCTTTTGCAGGTTGCAGTTTTGAAAGATGGGTCAAACGTTGGG
CTGCATTCAGGTGGAGCAGTCAAAAGTAGTCATCAGAGAACAATTTGGAA
AGTTTGATCATGTGCTTGAACCTGGGTGTCAATGCTTGCCTTGGTGCCTT
GGCTACAAGGTAGCTGGTCGGCTTTCACTCCGGGTGCAACAACTGGATGT
TAAATGTGAAACAAAGACTAAGGATAATGTTTTTGTCAATGTGGTTGCTT
CCGTTCAATATCGTGCCTTGGCTGATAAAGCTTATGATGCTTTCTATAAG
CTCTCCAACACCAGGGGCCAAATCCAAGCCTATGTCTTTGATGTTATCAG
GGCAAGCGTACCAAAACTGAACTTAGATGCCGCCTTTGAGCAGAAGAATG
AAATTGCCAAAGCCGTTGAAGAGGAGCTCGAAAAGGCCATGTCTCATTAT
GGGTATGAGATAGTGCAGACTCTTATTGTGGATATTGAGCCAGATGTTCA
TGTAAAGAGAGCAATGAATGAGATCAATGCAGCTGCAAGACTGAGGCTGG
CAGCAAATGAGAAGGCTGAGGCAGAGAAGATATTGCAAATCAAACGAGCT
GAAGGGGAGGCTGAGGCAAAATACCTGTCCGGACTTGGGATAGCACGTCA
GCGCCAGGCTATTGTTGATGGGTTAAGAGACAGTGTGCTTGCCTTCTCTG
AGAATGTTCCTGGAACAACCTCCAAGGATGTCATGGACATGGTTCTGGTG
ACTCAATACT
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