CV884642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.964e-34 Identity = 91/238 (38.24%), Postives = 127/238 (53.36%), Query Frame = -1 Query: 218 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQEN----EETSHAVEAEAPVSEQSKN--------------HVSSENANAQLXXXXXXXXXXXXXXXXXXXXSMNWVQFSDSRTILSNVYQQ----------------------PQLVKVEEQSLLFNPEDPCNIFSVDQAPTLQWY 811 V QVKALEKNFE+DNKLEP+RKVKLA+ELGLQPRQ+A+WFQNRRAR K+K+LERDYG+LK+N+DAL+ + ++LQ++N++L +++ELKAKL E EE EA S + N H+ ++ ++L SDS +L+ Y Q VK+EE LF+ E+ C +F+ ++ QWY Sbjct: 78 VEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVMANNEVLELSHRSPSPPPHIPTDAPTSELAFEMFSIFPRTENFRDDP------ADSSDSSAVLNEEYSPNTVEAAGAVAATTVEMSTMGCFSQFVKMEEHEDLFSGEEACKLFADNE----QWY 305
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.895e-33 Identity = 89/246 (36.18%), Postives = 128/246 (52.03%), Query Frame = -1 Query: 212 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLC-----QENEETSHAVEAEAPVSEQSKNHVSSENANAQLXXXXXXXXXXXXXXXXXXXXSMNWVQFSDSRTIL------------------------------SNV-------------YQQPQLVKVEEQSLLFNPEDPCNIFSVDQAPTLQWYFT 805 QVKALEKNFE++NKLEP+RKVKLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK YD+LR ++++L+++NE+L E+ +LK KL +E EE + AV E+ +S + + E +N+ F+D R +L SNV +Q ++ + E+ + E+ C FS +Q P+L WY T Sbjct: 70 QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKIT---------EAPSSPPQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSSALLNEESSSNVTVAAPVTVPGGNFFQFVKMEQTEDHEDFLSGEEACEFFSDEQPPSLHWYST 306
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 7.206e-31 Identity = 81/223 (36.32%), Postives = 119/223 (53.36%), Query Frame = -1 Query: 218 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENANAQLXXXXXXXXXXXXXXXXXXXXSMNWV------QFSDSRTILSNVYQQP----------------QLVK---VEEQSLLFNPEDPCNIFSVDQAPTLQWY 811 V QVKALEKNFE++NKLEP+RK KLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK YD+LR ++++L+++N++L E+ ++KAK+ E + ++ E E+ S ++ Q + V DS +L++ Q VK E+ + E+ C FS +Q P+L WY Sbjct: 65 VDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKEEEVHKTDSIPSSPLQFLEHSSGFNYRRSFTDLRDLLPNSTVVEAGSSDSCDSSAVLNDETSSDNGRLTPPVTVTGGSFLQFVKTEQTEDHEDFLSGEEACGFFSDEQPPSLHWY 287
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.605e-30 Identity = 64/109 (58.72%), Postives = 86/109 (78.90%), Query Frame = -1 Query: 485 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVS 811 V QV+ALE++FEV+NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YD+LRLD++ L+++ +AL AE++ELKAKL E S E P + Sbjct: 57 VEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAA 165
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.605e-30 Identity = 64/109 (58.72%), Postives = 86/109 (78.90%), Query Frame = -1 Query: 485 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVS 811 V QV+ALE++FEV+NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YD+LRLD++ L+++ +AL AE++ELKAKL E S E P + Sbjct: 57 VEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAA 165
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.318e-29 Identity = 82/213 (38.50%), Postives = 120/213 (56.34%), Query Frame = -1 Query: 218 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQEN----------EETSHAVEAEAPVSEQSKNHVSSENANAQLXXXXXXXXXXXXXXXXXXXXSMNWVQFSDSRTIL--SNVYQQPQLVKVEEQSLLFNPED--PCNIFSVDQ-APTLQWY 811 V QV+ALE++FE +NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YDALR D++ L+++ +AL AE++ELK KL E+ EE A +A+ P + + S +++A L S +L + V+ QL+KV++ F +D C F D+ P+L W+ Sbjct: 49 VEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDADPPATGAPQGS-SESDSSAVLNDAEILPHKPAPAAAADAAASEETEAVVTGAALLHHAEVFFHGQLLKVDDDEAAFLGDDGAACGGFFADEHLPSLPWW 260
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.318e-29 Identity = 82/213 (38.50%), Postives = 120/213 (56.34%), Query Frame = -1 Query: 218 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQEN----------EETSHAVEAEAPVSEQSKNHVSSENANAQLXXXXXXXXXXXXXXXXXXXXSMNWVQFSDSRTIL--SNVYQQPQLVKVEEQSLLFNPED--PCNIFSVDQ-APTLQWY 811 V QV+ALE++FE +NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YDALR D++ L+++ +AL AE++ELK KL E+ EE A +A+ P + + S +++A L S +L + V+ QL+KV++ F +D C F D+ P+L W+ Sbjct: 49 VEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDADPPATGAPQGS-SESDSSAVLNDAEILPHKPAPAAAADAAASEETEAVVTGAALLHHAEVFFHGQLLKVDDDEAAFLGDDGAACGGFFADEHLPSLPWW 260
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29 Identity = 59/104 (56.73%), Postives = 85/104 (81.73%), Query Frame = -1 Query: 494 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEA 805 QV+ALE++F+ DNKL+PDRK ++A +LGLQPRQ+AVWFQNRRAR K+K+LERD+ L+A +DALR D + L+++ +AL AE+REL+ KL + +T+ +V+ EA Sbjct: 80 QVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTKPADTAASVKVEA 183
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.170e-27 Identity = 59/105 (56.19%), Postives = 85/105 (80.95%), Query Frame = -1 Query: 494 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANY-DALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEA 805 QV+ALE++F+ DNKL+PDRK ++A +LGLQPRQ+AVWFQNRRAR K+K+LERD+ L+A + DALR D + L+++ +AL AE+REL+ KL + +T+ +V+ EA Sbjct: 80 QVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKLPTKPADTAASVKVEA 184
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.116e-26 Identity = 58/109 (53.21%), Postives = 80/109 (73.39%), Query Frame = -1 Query: 479 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQ 805 QV LEK+FE +NKLEP+RK +LA++LGLQPRQ+AVWFQNRRAR K+K+LERDY LLK+ YD L +Y+++ +N+ L +E+ L KL Q +ET++ + P Q Sbjct: 76 QVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL-QGKQETANEPPGQVPEPNQ 183 The following BLAST results are available for this feature:
BLAST of CV884642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884642 ID=CV884642; Name=CV884642; organism=Citrus sinensis; type=EST; length=811bpback to top |