CV884406

Overview
NameCV884406
Unique NameCV884406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7063 contig Csv1_Contig7063:50..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.521e-58
Identity = 114/228 (50.00%), Postives = 151/228 (66.23%), Query Frame = 2
Query:   23 DVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---XXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKK-AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMP-ETDKLAEFAKVLAKLRAS 691
            ++K+LG W SP+ +R R+ L +KS+ YEY+EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W             DPY+RAVARFWAAYVD+K+ PA  +I  G   E ++ AA+ Q +  L  LE AF +CSKGKPFFGG  +GF+D+  G YLGW    +K+   +L+D  +TP L  W ERF A  A K V+P + DKL EF + L +  AS
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQTLLRWSAS 233          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.075e-46
Identity = 97/218 (44.50%), Postives = 140/218 (64.22%), Query Frame = 2
Query:   17 KSDVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPAL-KSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAK 667
            + DVK+LG   SPFV R +IALK+K VEY++LEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W          DPY RA+ARFW+ ++D+K+  A+ KS+ + D  E +K  +E+  E L  LE+      K K FFGG + G +DIA      W+ + +++  ++L    K P L+KW++ F     V +V+P  D L  + K
Sbjct:    5 QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETW--KNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREK-NVEETYEALQFLENEL----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.519e-45
Identity = 100/221 (45.25%), Postives = 130/221 (58.82%), Query Frame = 2
Query:   11 MAKSDVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 673
            MA  +V +L  WPS F MR RIAL  K ++YEY EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W          DPYDRA ARFWA Y+D+KL+   + + +  G E ++AA +  IE L +LE A       KP+FGG   GF+DIA   Y  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKG-EEQEAAKKDFIECLKVLEGAL----GDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.637e-44
Identity = 97/221 (43.89%), Postives = 130/221 (58.82%), Query Frame = 2
Query:   11 MAKSDVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 673
            MA  +V +L  WPS F MR RIAL  K ++YEY +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W          DPYDRA ARFWA Y+D+KL+   + + +  G E ++AA +  IE L +LE A       +P+FGG   GF+DIA   +  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKG-EEQEAAKKDFIECLKVLEGAL----GDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.186e-40
Identity = 91/225 (40.44%), Postives = 135/225 (60.00%), Query Frame = 2
Query:   26 VKVLGAWPSPFVMRARIALKIKSVEYEYLEENLG-SKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEA-----WXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQI--GFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 673
            ++VLG   SPF  RAR+AL ++ V YE L+E LG  KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++                 DPY+RA+ RFW A++D+K +PAL ++       A+  A E     L LLE+AF   S G+ FF G     G LD+A GC+L  +R  E+++ + L+D   TP L  W++RF A  A K V+P+T+K+ +F + L
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTRFL 225          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.581e-39
Identity = 90/215 (41.86%), Postives = 131/215 (60.93%), Query Frame = 2
Query:   20 SDVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKS-IGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 661
            ++VK+LG W SPF  R   ALKIK V+YEY+EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +          DPYDRA+ARFWA ++D+K+   +K+ +  G+  E  K   E++ E L +L++      K K FF G + GF DIA      W+ V E+ + V L+   K P   KW   +   + +K+ +P  D+L  F
Sbjct:    2 AEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDK---EEVCEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.748e-38
Identity = 89/217 (41.01%), Postives = 123/217 (56.68%), Query Frame = 2
Query:   11 MAKSDVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 661
            M  ++V +L  WPS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W          DPY+R+ ARFWA Y+D+K++   + + SG G E ++ A ++ IE L  LE         K +FGG  +GF+D+A   +  W    E      +  E + P L  WA+      +V   +P   K+  F
Sbjct:    1 MESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVW-HDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKG-EDQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKIYGF 209          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.748e-38
Identity = 93/228 (40.79%), Postives = 136/228 (59.65%), Query Frame = 2
Query:   20 SDVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL-----AEFAKVLAKLRA 688
            ++VK+LG W SPF  R   ALK+K V+YEY+EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +          DPYDRA+ARFW+ ++ +K+  A+ +     G E +K   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   +W + +   + VK+ +P  D+L     A F  V+A + A
Sbjct:    2 AEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKV-AAVVNTFFRKGEEQEKGK-EEVYEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQAVVASISA 221          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.087e-38
Identity = 91/214 (42.52%), Postives = 129/214 (60.28%), Query Frame = 2
Query:   20 SDVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 661
            ++VK+LG W SPF  R   ALKIK V+YEY+EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +          DPYDRA+ARFWA ++D+K+  A+ +     G E +K   E++ E L +L++      K K FF G + GF DIA      W+ V E+     L+   K P   KW + +   + V + +P  D+L  F
Sbjct:    2 AEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGK-EEVYEMLKVLDNEL----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
BLAST of CV884406 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37
Identity = 84/210 (40.00%), Postives = 116/210 (55.24%), Query Frame = 2
Query:   23 DVKVLGAWPSPFVMRARIALKIKSVEYEYLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWXXXXXXXXXXDPYDRAVARFWAAYVDEKLFPALKSIGSGDGAEAKKAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 652
            +V +L  W S + MRARIAL  K V YEY EENL ++S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W          DPY R+ ARFW  Y+D+K++   K +    G E ++   ++LI     LE+        KPF+G    GF+D+    +  W    E     K+  E + P L  W +R      V + +P+  K+
Sbjct:    4 EVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVW-NDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGK-KELISIFKQLEETLT----DKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
The following BLAST results are available for this feature:
BLAST of CV884406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTU6_ORYSJ1.521e-5850.00Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX6_SOYBN5.075e-4644.50Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX4_TOBAC2.519e-4545.25Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC3.637e-4443.89Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX2_MAIZE3.186e-4040.44Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTX1_TOBAC1.581e-3941.86Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC1.748e-3841.01Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX3_TOBAC1.748e-3840.79Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC5.087e-3842.52Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_SOYBN7.345e-3740.00Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003C03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884406 ID=CV884406; Name=CV884406; organism=Citrus sinensis; type=EST; length=732bp
AAAAAAGAAAATGGCAAAAAGCGACGTGAAGGTTTTGGGTGCGTGGCCAA
GCCCATTTGTGATGAGGGCAAGAATCGCACTTAAGATCAAGTCTGTGGAG
TATGAGTATCTGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTGCTTAA
ATCAAACCCTGTTCACAAGAAAATCCCAGTTCTGATTCACAATGATAAGC
CTGTTTGCGAATCTCTCATCATTGTCGAGTACGTGGATGAGGCTTGGTCC
TCTTCAGGTCCCTCTATTATTCCTTCTGATCCTTATGACCGTGCCGTTGC
TCGTTTCTGGGCCGCTTATGTTGATGAGAAGTTGTTCCCTGCCTTGAAAA
GCATTGGTAGTGGAGATGGAGCGGAAGCTAAGAAAGCTGCGATTGAGCAA
TTGATTGAAGGCTTGGTTTTGCTGGAGGATGCTTTTGTTAAGTGTAGCAA
AGGGAAGCCTTTCTTTGGTGGAAGCCAAATTGGGTTTCTTGACATTGCAT
TTGGTTGCTACTTGGGATGGGTGAGAGTGACAGAGAAAATGAATGAGGTG
AAGCTCCTTGATGAAGTCAAAACTCCTGGACTGTTCAAATGGGCTGAGAG
ATTCTGTGCTGATGCCGCTGTCAAAGATGTTATGCCTGAGACTGATAAGC
TTGCAGAGTTTGCTAAGGTTCTTGCCAAACTCAGAGCTTCTGGCAAATGG
AATTAAGAAGCTTAATTCTGTGCCTGGAGGGG
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