CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_ORYSJ (Histidyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os05g0150900 PE=2 SV=2) HSP 1 Score: 454.521 bits (1168), Expect = 3.618e-127 Identity = 224/293 (76.45%), Postives = 260/293 (88.74%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 DQGGELCSLRYDLTVPFARYVAMN ++S KR+QIAKVYRRDNPSKGRYREFYQCDFDIAG YE M PDFEV+K+LTELL++LDIG YEIKLNHR LLDGMLEICGVP EKFRT+CSSIDKLDKQ+FEQ+KKE+V+EKG+S ETAD+IG VK RG PL +L +LR+EGS F+ N+ + AL++LEILF+AL+K+ I K+VFDLSLARGLDYYTGVI+EA+FKG TQVGSIAAGGRYDNL+GMF KQVPAVGVSLGIERVF IMEQ + E+NQ IRATET+VLV ++G + + Sbjct: 416 DQGGELCSLRYDLTVPFARYVAMNNISSLKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYETMEPDFEVIKVLTELLDQLDIGTYEIKLNHRKLLDGMLEICGVPPEKFRTVCSSIDKLDKQTFEQVKKELVDEKGISNETADKIGDLVKTRGPPLEVLLELRKEGSKFMGNAGSVTALNELEILFKALDKANAIGKIVFDLSLARGLDYYTGVIYEAVFKGTTQVGSIAAGGRYDNLVGMFSGKQVPAVGVSLGIERVFAIMEQQEMEKNQ-IRATETEVLVSIIGKDLI 707
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHC_DICDI (Histidyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=hisS PE=3 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 1.436e-91 Identity = 169/287 (58.89%), Postives = 212/287 (73.87%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 857 DQGGE+CSLRYDLTVPFARYVAMNG+ + KR+ IA+VYRRDNP +KGR+REFYQCDFDIAG Y+ M PD E + ++ E+L ++ +GD++IKLNHR LLD + ICGVP++KFR ICS++DKLDK +E+++KEMVE K L AD+I FV + P+ LL LR G + N A AL LE LF LE ++FDLSLARGLDYYTG+I+EA+ G +VGSIAAGGRYD L+GM+G K VPAVG S+GIER+FTI+E K+ N+ IR TQV V Sbjct: 102 DQGGEICSLRYDLTVPFARYVAMNGVLNIKRYHIARVYRRDNPIMTKGRFREFYQCDFDIAGTYDLMVPDAECLVMICEILEQVKVGDFQIKLNHRKLLDAIFAICGVPADKFRAICSAVDKLDKSPWEEVRKEMVEVKALDGAVADKIEKFVSLKDEPIKLLQHLRATG-MCDGNKDATEALSQLETLFGYLECFGVTQHILFDLSLARGLDYYTGIIYEAVLTGQDRVGSIAAGGRYDGLVGMYGKKDVPAVGFSIGIERIFTILEDEYKKENKKIRENATQVFV 387
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHC_BOVIN (Histidyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=HARS PE=2 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 1.755e-89 Identity = 174/297 (58.59%), Postives = 221/297 (74.41%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 857 DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYRRDNP+ +GRYREFYQCDFDIAGQ++ M PD E +KI+ E+L+ L IGD+ +K+N R +LDGM ICGVP KFRTICSS+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G + L+ +L Q+ L +N A L DL++LF+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV Sbjct: 119 DQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDPMLPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVPDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG-VSLVEQLLQDPKL-SQNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQPPARAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLV 413
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHC_TAKRU (Histidyl-tRNA synthetase, cytoplasmic OS=Takifugu rubripes GN=hars PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 5.107e-89 Identity = 175/315 (55.56%), Postives = 221/315 (70.16%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGA------------------TQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 DQGGEL SLRYDLTVPFARY+AMN +T+ KR+ IAKVYRRDNP+ +GRYREFYQCDFDIAGQY+ M PD E +KI+ E+L+ELD+GD+ IK+N R +LDGM +CGVP FRTICS++DKLDK +E +K EMV EKGLS E AD+IG +V +G + L +L Q+ + +++ A L D+++LF L+ + DKVVFDLSLARGLDYYTG+I+EAI A VGS+A GGRYD L+GMF K +VP VGVS+GIER+F+IMEQ + + IR TE QV+V N L Sbjct: 124 DQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQYDAMIPDAECLKIVHEILSELDLGDFRIKVNDRRILDGMFAVCGVPDNMFRTICSTVDKLDKLPWEAVKNEMVNEKGLSEEAADQIGVYVGMQGG-MDLAERLLQDQKM-CQSTQACAGLTDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEAILTQAGVAPVAPETSNEAPTEECVTVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASTEKIRTTEVQVMVAAAQKNLL 436
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHC_MOUSE (Histidyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Hars PE=2 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 1.138e-88 Identity = 175/297 (58.92%), Postives = 223/297 (75.08%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAI-FKGATQ-------VGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 857 DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYRRDNP+ +GRYREFYQCDFDIAGQ++ M PD E +KI+ E+L+ L IG++ +K+N R +LDGM +CGVP KFRTICSS+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G + L+ +L Q+ L +N A L DL++LF+ L DK+ FDLSLARGLDYYTGVI+EA+ + TQ VGSIAAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV Sbjct: 119 DQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG-VSLVEQLLQDPKL-SQNKQAVEGLGDLKLLFEYLILFGIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEASEEKVRTTETQVLV 413
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHC_HUMAN (Histidyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=HARS PE=1 SV=2) HSP 1 Score: 323.939 bits (829), Expect = 7.375e-88 Identity = 173/297 (58.25%), Postives = 219/297 (73.74%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 857 DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYRRDNP+ +GRYREFYQCDFDIAG ++ M PD E +KI+ E+L+ L IGD+ +K+N R +LDGM ICGV KFRTICSS+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G + L+ +L Q+ L +N A L DL++LF+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + IR TETQVLV Sbjct: 119 DQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG-VSLVEQLLQDPKL-SQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLV 413
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHC_PONAB (Histidyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=HARS PE=2 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 3.660e-87 Identity = 171/297 (57.58%), Postives = 219/297 (73.74%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 857 DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYRRDNP+ +GRYREFYQCDFDIAG ++ M PD E +KI+ E+L+ L IGD+ +K+N R +LDGM ICGV KFRTICSS+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G + L+ +L Q+ L ++ A L DL++LF+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV Sbjct: 119 DQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG-VSLVEQLLQDPKL-SQSKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLV 413
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHM_PONAB (Probable histidyl-tRNA synthetase, mitochondrial OS=Pongo abelii GN=HARS2 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 2.078e-82 Identity = 162/305 (53.11%), Postives = 216/305 (70.82%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 DQGGEL SLRYDLTVPFARY+AMN + KR+ + KV+RR++P+ +GRYREF QCDFDIAGQ++ M PD E +KI+ E+L+ L +GD+ IK+N R ++DGM +CGVP KFR ICSSIDKLDK +++ ++ EMV +KGL+ E ADRIG +V+ G + L+ ++ Q+ L +N A L DL++LF+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F I+EQ K + + +R TETQV V NFL Sbjct: 120 DQGGELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPTIVQGRYREFCQCDFDIAGQFDPMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPESKFRAICSSIDKLDKMAWKDVRHEMVVKKGLAPEVADRIGDYVQCHGG-VSLVEQMFQDPRL-SQNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFL 422
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYHM_HUMAN (Probable histidyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=HARS2 PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 2.078e-82 Identity = 162/305 (53.11%), Postives = 216/305 (70.82%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 DQGGEL SLRYDLTVPFARY+AMN + KR+ + KV+RR++P+ +GRYREF QCDFDIAGQ++ M PD E +KI+ E+L+ L +GD+ IK+N R ++DGM +CGVP KFR ICSSIDKLDK +++ ++ EMV +KGL+ E ADRIG +V+ G + L+ ++ Q+ L +N A L DL++LF+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F I+EQ K + + +R TETQV V NFL Sbjct: 120 DQGGELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPTIVQGRYREFCQCDFDIAGQFDPMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPESKFRAICSSIDKLDKMAWKDVRHEMVVKKGLAPEVADRIGDYVQCHGG-VSLVEQMFQDPRL-SQNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFL 422
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_SCHPO (Histidyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=hts1 PE=1 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.489e-80 Identity = 166/320 (51.88%), Postives = 213/320 (66.56%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNG-LTSFKRHQIAKVYRRDNPS--KGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQ-------------------------VGSIAAGGRYDNLIGMFGTK---QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG 869 DQGGELCSLRYDLTVPFAR++AMN +TS KR IAKVYRRD P+ KGR REFYQCDFDIAG Y+ M PD E +K+L E L+ L++G+Y IKLNHR +LDG+ +CGVP +K RTI S++DKLDK +E +++EMV EKGL E AD+I +V +G LL KL + SL NSSA A +D+ +LF LE +D+ FD+SLARGLDYYTG+I+EA+ + + VGSIAAGGRYDNL+GMF K ++P VG+SLG+ER+F+I+ K ++ IRA + V V G Sbjct: 126 DQGGELCSLRYDLTVPFARWLAMNPKVTSIKRFHIAKVYRRDQPAMTKGRMREFYQCDFDIAGNYDPMIPDSEALKVLVEALDALEVGNYTIKLNHRKILDGIFTVCGVPDDKIRTISSAVDKLDKLPWEDVRREMVVEKGLKEEVADKIKEYVLLKGD-RSLLDKLEAD-SLLSSNSSAVAAFNDMRLLFDYLEAFGVLDRFSFDMSLARGLDYYTGIIYEAVTEASAPKIKSSAEKKKSADPEADRSNDDSIGVGSIAAGGRYDNLVGMFAAKKNAKIPCVGISLGLERIFSILR--SKIPDEDIRANDVDVFVMAFG 441 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |