CX043286

Overview
NameCX043286
Unique NameCX043286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13760 contig Csv1_Contig13760:147..975. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX043286 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.564e-20
Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = -2 
Query:  421 GNKVESNLEYKLLEVKNGTSGGFSIHGGTNGE-CPLDVVQLSSPTERDHYVRLLPFDNST-VVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVG 828
            G+++++ ++Y +L   +G  GG    G   G+ CP  VVQ  S  +    V     D+   VVR STD+N+              VW + NY+ S GKW++TT G+ G PG  TL +WFK++K  V  Y    CPSVCDSC  LC+ +G
Sbjct:   36 GDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184
[Close]
BLAST of CX043286 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 9.491e-18
Identity = 54/154 (35.06%), Postives = 79/154 (51.30%), Query Frame = -2 
Query:  415 GNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGE--CPLDVVQLSSPTERDHYVRLLPFD-NSTVVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVS-IYNLVHCPSVCDSCVKLCNKVGIF 828
            G K+ +   Y ++ V     GG ++   T NG   CP  VVQ     + D  +   P +    VVR STDLN+              VW +  Y+ S G++F+T GG+ G+PG +T+ +WFK+++   S  Y LV CP+VC SC   C  VGI+
Sbjct:   41 GEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194
The following BLAST results are available for this feature:
BLAST of CX043286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC1.564e-2037.5821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU9.491e-1835.06Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_10A12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A12-B24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043286 ID=CX043286; Name=CX043286; organism=Citrus sinensis; type=EST; length=829bp
GAGACATAATTTATTGCATTTTGTATATGTAAATCCAATGAGGAGTTGCC
ATCAAGACGCATGTTTACATCATAGAAAATAACAATTGCCTCCATGTTAA
ACACTCAAACCTAGCAACCTCTTGAGCCTTCAGTCCAAAATGCCACGGAA
TCGATCGTCATTTTTTTCCCCCTTTTACACATAACAAAGTAGAAATTAAC
AGCATAAATATATATCCCAGGCTAGCTAATTAATTTACTATTAATCATAG
AGATTAGAGTACTAGCTAGCCTGGTAAATTATTCAGAATATATAATATAG
CTAGGTCATTCATTACATAGAGGATCTTGAAGGATTAGGAGCTGGAAATA
ACACCAACCGGAGAGGCTGATCATCATCACGAACCAGAACCAGACGTCGA
ACGCCGTCCACATAAAAGATGCCGACTTTGTTACAGAGTTTAACGCAAGA
ATCGCAAACAGATGGACAATGAACAAGATTGTATATACTGACACTAACTT
TCTTAAGCTTAAACCAATTTAGCAACGTTTTAGCTCCTGGGTGGCCGACG
ATTCCTCCGGTTGTTAGAAACCATTTTCCTAATGAAGCATTATAGTTACC
AACTGTCCATACTGGTTCTATCAAGTTGAGATCAGTGGATTCCCGGACAA
CTGTAGAATTGTCAAACGGTAATAATCTTACATAATGATCCCTTTCCGTA
GGAGAACTTAGTTGGACAACGTCCAACGGACACTCTCCATTTGTGCCTCC
ATGTATACTGAATCCACCACTAGTGCCATTTTTGACTTCGAGAAGCTTAT
ACTCGAGGTTGGATTCGACCTTGTTGCCA
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