EG358374

Overview
NameEG358374
Unique NameEG358374
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length379
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358374 vs. ExPASy Swiss-Prot
Match: Y1487_ARATH (Uncharacterized protein At1g14870 OS=Arabidopsis thaliana GN=At1g14870 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-17
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 3 
Query:    6 LKGGPCGDCLAHFCCETCALSQEYRELKARGFDMSLGWHGNLERQNRGLEMAPTAPVMEHGMIR 197
            +KG  C DCL HFCCE C+L+Q+YRELK RG+DMSLGW GN+ERQ     +A  APV + GM R
Sbjct:   89 IKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQNQGGVAMGAPVFQGGMTR 152
The following BLAST results are available for this feature:
BLAST of EG358374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1487_ARATH1.431e-1760.94Uncharacterized protein At1g14870 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank description6c4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0006c4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358374 ID=EG358374; Name=EG358374; organism=Citrus sinensis; type=EST; length=379bp
ACATGTTAAAAGGCGGGCCTTGCGGGGATTGCTTGGCTCATTTTTGCTGC
GAGACGTGTGCCTTGAGTCAAGAATATCGCGAGCTCAAAGCCCGTGGATT
CGACATGTCTCTTGGATGGCATGGAAATTTGGAGAGACAAAATAGGGGAT
TGGAAATGGCTCCAACGGCTCCGGTAATGGAACATGGCATGATAAGATAA
AGTGGATGATCTGCAAATATACAAAATGAATTCGTCTACCTAATTTTAAA
TAATTAGTAGACATGTGAAGCTGATAATTATATGCTGTTATCTTAATTAT
TTAGCTGTTTTAGATCTTCCTCTCAACATCCAGCGTTTGTAGCTCTTTAA
GCCTTTGAAGTTTGAGATTTTCTTTTATG
back to top