EG358357

Overview
NameEG358357
Unique NameEG358357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length542
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EG358357_ssr109 microsatellite EG358357_ssr109:109..120. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7453 contig Csv1_Contig7453:165..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.920e-59
Identity = 106/180 (58.89%), Postives = 139/180 (77.22%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            HLKD +LEG +PF KA+     FEY  KD R   +FNQ MSNH+ ++MKKILEIY+GF+ +  +VDV GG GA L+++VSKYP I+GINFD PHVI+DAPSYPGV+HVGGDMFV VPKG+AIF+K I HDWSD  C+K LKNC++ALPE GKVI+ + L+PE+ ++ + ++    +D+ M
Sbjct:  142 HLKDAVLEGGIPFNKAYGM-TAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIM 320          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 8.392e-59
Identity = 104/180 (57.78%), Postives = 137/180 (76.11%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            HLKD +L+G +PF KA+   + FEY   D R   +FN  MSNH+ + MKKILE YKGFE +  LVDV GG+GA L ++VSKYP ++GINFD PHVI+DAPS+PG+EHVGGDMFV VPKG+AIF+K I HDWSD+ CVK LKNCY++LPE GKVI+ + ++PE+ ++ + ++ V  +D  M
Sbjct:  140 HLKDAILDGGIPFNKAYGM-SAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIM 318          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.096e-58
Identity = 105/180 (58.33%), Postives = 136/180 (75.56%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            HL D +++G +PF KA+     FEY   D R   +FNQ MSNH+ + MKKILE Y GF+ +  +VDV GG GA L+++VSKYP I+GINFD PHVI+DAPSYPGVEHVGGDMFV VPKG+AIF+K I HDWSD+ CVK LKNCYDALP+ GKVI+ + ++PE+ +T + ++ V  +D+ M
Sbjct:  140 HLSDAVVDGGIPFNKAYGM-TAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIM 318          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 4.165e-58
Identity = 104/180 (57.78%), Postives = 135/180 (75.00%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            HLKD +L+G +PF KA+     FEY   D R   +FNQ MSNH+ + MKKILE Y GF+ +  +VDV GG GA L++++SKYP I+GINFD PHV++DAPSYPGVEHVGGDMFV VPKG+AIF+K I HDWSD  CVK LK CY+ALPE GKVI+ + ++PE+ +T + ++ V  +D+ M
Sbjct:  140 HLKDAVLDGGIPFNKAYGM-TAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIM 318          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.212e-57
Identity = 102/180 (56.67%), Postives = 137/180 (76.11%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            HLKD +L+G +PF KA+     FEY   D R   +FNQ MSNH+ + MKKILE+Y+GFE +  +VDV GG GA L++++SKYP I+GINF+ PHV++DAPS+ GVEHVGGDMFV VPKG+AIF+K I HDWSDD C K+LKNCY ALP+ GKVI+ + ++PE+ +T + ++ V  +D+ M
Sbjct:  129 HLKDAVLDGGIPFNKAYGM-TAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVM 307          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 7.855e-57
Identity = 104/180 (57.78%), Postives = 135/180 (75.00%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            +LKD +L+G +PF KA+     FEY   D R   +FN+ MS+H+ + MKKILE YKGFE +  LVDV GG GA ++ +VSKYP I+GINFD PHVI+DAPSYPGVEHVGGDMFV VPK +A+F+K I HDWSD  C+K LKNCYDALPE GKVI+V+ ++P + +T + ++ V  +D+ M
Sbjct:  142 YLKDAILDGGIPFNKAYGM-TAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIM 320          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.340e-56
Identity = 104/180 (57.78%), Postives = 134/180 (74.44%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            +LKD +LEG +PF KA+     FEY   D R   +FN+ MS+H+ + MKKILE YKGFE +  LVDV GG GA ++ +VSKYP I+GINFD PHVI+DAPSYPGVEHVGGDMFV VP  +A+F+K I HDWSD  C+K LKNCYDALPE GKVI+V+ ++P + +T + ++ V  +D+ M
Sbjct:  142 YLKDAILEGGIPFNKAYGM-TAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIM 320          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 3.898e-56
Identity = 102/180 (56.67%), Postives = 135/180 (75.00%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            HLKD +LEG +PF KA+     FEY   D R   +FN+ M++H+ + MKKILE YKGFE +  +VDV GG GA L+++VSKYP I+GINFD PHVI+DAP YPGVEHVGGDMFV VPKG+AIF+K I HDWSD+ C+K LKNCY ALP+ GKVI+ + ++P + ++ + ++ V  +D+ M
Sbjct:  142 HLKDAVLEGGIPFNKAYGM-TAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIM 320          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 3.898e-56
Identity = 102/171 (59.65%), Postives = 129/171 (75.44%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSR 515
            HL D +L+G +PF KA+     FEY   D R   +FN  MS+HT L MKKILE Y GFE +N +VDV GG GA ++++VSKYP I+GINFD PHVI+DAPSYPGVE VGGDMFV VPK +AIF+K I HDWSDD C+K+LKNCY+ALP  GKVI+V+ ++PE+ +T   ++
Sbjct:  138 HLTDAVLDGGVPFNKAYGMTT-FEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATK 307          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 5.091e-56
Identity = 103/180 (57.22%), Postives = 133/180 (73.89%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            +LKD +L+G +PF KA+     FEY   D R   +FN+ MS+H+ + MKKI E+Y GFE +N +VDV GG GA LS++V+KYP I+GINFD PHVI+DAP YPGVEHVGGDMFV VPKG+AIF+K I HDWSD+ C+K LKNCY ALPE GKVIV + ++P S +  + ++ V  +D  M
Sbjct:  147 YLKDAILDGGIPFNKAYGM-TAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIM 325          
The following BLAST results are available for this feature:
BLAST of EG358357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
COMT1_CATRO4.920e-5958.89Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
OMT1_ARATH8.392e-5957.78Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_OCIBA1.096e-5858.33Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT2_OCIBA4.165e-5857.78Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_COFCA1.212e-5756.67Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_POPTM7.855e-5757.78Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_POPKI1.340e-5657.78Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_PRUDU3.898e-5656.67Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CAPCH3.898e-5659.65Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CLABR5.091e-5657.22Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]

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Properties
Property NameValue
Genbank description6c3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0006c3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358357 ID=EG358357; Name=EG358357; organism=Citrus sinensis; type=EST; length=542bp
ACCACTTGAAAGATTGTTTATTGGAAGGGACCCTACCTTTTATGAAGGCA
CATAATACAAAAAATCCATTTGAGTATGCTATGAAAGATGCTAGAAGACG
GAACCTCTTCAATCAATCAATGAGCAATCATACGGCTTTAGTTATGAAGA
AAATTCTTGAAATCTACAAAGGATTTGAAGAGATAAACCAATTGGTAGAT
GTTGCCGGTGGTTTAGGTGCTAATCTCAGCTTACTAGTTTCTAAATACCC
ACAAATTCGGGGTATTAACTTTGACTCGCCTCATGTCATTAAAGATGCAC
CTTCTTATCCAGGTGTGGAGCATGTTGGAGGAGATATGTTTGTTGAAGTG
CCTAAAGGAGAAGCTATTTTTCTGAAGTTGATACTTCATGACTGGAGTGA
TGACCAATGTGTGAAGATACTGAAGAATTGCTACGATGCTCTTCCAGAAT
TCGGGAAGGTCATTGTGGTAGACTCTTTAATACCAGAGTCCCTTGAGACT
GATATTTTAAGCAGGCTTGTTTATCTGCTTGACATACAAATG
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