CX671260

Overview
NameCX671260
Unique NameCX671260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5038 contig Csv1_Contig5038:1..918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671260 vs. ExPASy Swiss-Prot
Match: ABI5_ARATH (Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.473e-43
Identity = 109/227 (48.02%), Postives = 124/227 (54.63%), Query Frame = 2
Query:  173 MVAPEPETLSQGEVESALRADQHQ-------KTLTLLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLTSIWNAEENQAINSSTQDXXXXXXXXXXXXXXXXHTVQHLPVNETTAATTAHGS-----------IVKQPSLSRQASLTLPAPLCRKTVEEVWSEIHRGQQGGH-QQXXXXXXXXXXXXXXXXXPEAASRQPTFGEMTLEDFLIKAGVVREQNTTP 796
            MV  E +  S+ EVES++   +H           T LGRQSSIYSLTLDEFQH LCE+GKNFGSMNMDEFL SIWNAEEN   N++ Q                     +    E      + GS           I  + SL RQ SLTLPAPLCRKTV+EVWSEIHRG   G+                     E A+RQPTFGEMTLEDFL+KAGVVRE  T P
Sbjct:    1 MVTRETKLTSEREVESSMAQARHNGGGGGENHPFTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEEN---NNNQQQAAAAAGSHSVPANHNGFNNNNNNGGEGGVGVFSGGSRGNEDANNKRGIANESSLPRQGSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAARQPTFGEMTLEDFLVKAGVVREHPTNP 224          
BLAST of CX671260 vs. ExPASy Swiss-Prot
Match: AI5L4_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.087e-24
Identity = 72/177 (40.68%), Postives = 91/177 (51.41%), Query Frame = 2
Query:  260 LGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLTSIWNAEENQAINSSTQDXXXXXXXXXXXXXXXXHTVQHLPVNETTAATTAHGSIVKQPSLSRQASLTLPAPLCRKTVEEVWSEIHRGQQGGHQQXXXXXXXXXXXXXXXXXPEAASRQPTFGEMTLEDFLIKAGVVREQNT 790
            L RQSS+YSLT DE Q TL E GK+FGSMNMDE L +IW AE+ QA  ++T                            + AA    G +     L RQ SLTLP  L +KTV+EVW  ++  ++G +                    +A  RQ T GEMTLEDFL++AGVV+E NT
Sbjct:   23 LARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNIWTAEDTQAFMTTT---------------------------SSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDEVWKYLN-SKEGSN---------------GNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNT 156          
BLAST of CX671260 vs. ExPASy Swiss-Prot
Match: AI5L2_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.266e-21
Identity = 67/174 (38.51%), Postives = 82/174 (47.13%), Query Frame = 2
Query:  260 LGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLTSIWNAEENQAINSSTQDXXXXXXXXXXXXXXXXHTVQHLPVNETTAATTAHGSIVKQPSLSRQASLTLPAPLCRKTVEEVWSEIHRGQQGGHQQXXXXXXXXXXXXXXXXXPEAASRQPTFGEMTLEDFLIKAGVVRE 781
            L RQSS+YSLTLDE Q+ L  SGK  GSMN+DE L S+ + E NQ                                    ++   +G    Q  LSRQ SLTLP  L +KTV+EVW +I + + GG                     E   +QPT GEMTLED L+KAGVV E
Sbjct:   16 LNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQP-----------------------------------SSMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAH------------------ERRDKQPTLGEMTLEDLLLKAGVVTE 136          
BLAST of CX671260 vs. ExPASy Swiss-Prot
Match: AI5L1_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.388e-20
Identity = 71/175 (40.57%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  260 LGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLTSIWNA-EENQAINSSTQDXXXXXXXXXXXXXXXXHTVQHLPVNETTAATTAHGSIVKQPSLSRQASLTLPAPLCRKTVEEVWSEIHRGQQGGHQQXXXXXXXXXXXXXXXXXPEAASRQPTFGEMTLEDFLIKAGVVRE 781
            +GRQ+SI SLTLDE Q    +SGK+FG+MNMDEFL ++W   EEN                                 NE   A   H    K   L RQ SL+LP PLC+KTV+EVW EI  G Q                       E   RQ T GE+TLEDFL+KAGVV+E
Sbjct:   35 VGRQNSILSLTLDEIQ---MKSGKSFGAMNMDEFLANLWTTVEEND--------------------------------NEGGGA---HNDGEKPAVLPRQGSLSLPVPLCKKTVDEVWLEIQNGVQ----------QHPPSSNSGQNSAENIRRQQTLGEITLEDFLVKAGVVQE 161          
BLAST of CX671260 vs. ExPASy Swiss-Prot
Match: AI5L6_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.920e-18
Identity = 63/178 (35.39%), Postives = 89/178 (50.00%), Query Frame = 2
Query:  260 LGRQSSIYSLTLDEFQHTLCES-GKNFGSMNMDEFLTSIWNAEENQAI--NSSTQDXXXXXXXXXXXXXXXXHTVQHLPVNETTAATTAHGSIVKQPSLSRQASLTLPAPLCRKTVEEVWSEIHRGQQGGHQQXXXXXXXXXXXXXXXXXPEAASRQPTFGEMTLEDFLIKAGVVREQ 784
            L RQ+S++SLT DEFQ++     GK+FGSMNMDE L +IW AEE+ ++  N+++                  + +  L V          G      SL RQ SLTLP  + +K V++VW E+ +    G+                        RQ T GEMTLE+FL++AGVVRE+
Sbjct:   27 LTRQNSVFSLTFDEFQNSWGGGIGKDFGSMNMDELLKNIWTAEESHSMMGNNTSYTNISNGNSGNTVINGGGNNIGGLAV----GVGGESGGFFTGGSLQRQGSLTLPRTISQKRVDDVWKELMKEDDIGN------------GVVNGGTSGIPQRQQTLGEMTLEEFLVRAGVVREE 188          
BLAST of CX671260 vs. ExPASy Swiss-Prot
Match: TRAB1_ORYSJ (bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 59/164 (35.98%), Postives = 69/164 (42.07%), Query Frame = 2
Query:  344 MNMDEFLTSIWNAEENQAINSSTQDXXXXXXXXXXXXXXXXHTVQHLPVNETTAATTAHGSIVKQPSLSRQASLTLPAPLCRKTVEEVWSEIHR-----------GQQGGHQQXXXXXXXXXXXXXXXXXPEAASRQPTFGEMTLEDFLIKAGVVREQNTTPVA 802
            MNMDE L SIW AEE+QA+ S++                              AA  A G       L RQ SLTLP  L  KTV+EVW ++ R           G  GG QQ                      RQPT GEMTLE+FL++AGVVRE      A
Sbjct:    1 MNMDELLRSIWTAEESQAMASAS-----------------------------AAAAAAEGG------LQRQGSLTLPRTLSVKTVDEVWRDLEREASPGAAAADGGGGGGEQQQPR-------------------RQPTLGEMTLEEFLVRAGVVRENTAAAAA 110          
The following BLAST results are available for this feature:
BLAST of CX671260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ABI5_ARATH4.473e-4348.02Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis... [more]
AI5L4_ARATH2.087e-2440.68ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arab... [more]
AI5L2_ARATH1.266e-2138.51ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arab... [more]
AI5L1_ARATH2.388e-2040.57ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arab... [more]
AI5L6_ARATH2.920e-1835.39ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arab... [more]
TRAB1_ORYSJ1.658e-1335.98bZIP transcription factor TRAB1 OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_10A02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10A02-A4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671260 ID=CX671260; Name=CX671260; organism=Citrus sinensis; type=EST; length=918bp
TGGGTGCGGGATTCAGCCCCATCACATTTCCCAATTAACATGCATGCACA
GGTGGTGACGTCAACCCACAACAAAATTGTGCCGTTTATCCCGCAAATTG
CTTTTTCTTTCCCCCAAATCTTTCATCATTTAGGTGTTGTTGCTTTGCTT
CCACAGCATTTGCAGTGCAAAAATGGTGGCACCAGAGCCGGAAACGCTGT
CCCAAGGCGAGGTGGAATCAGCATTGCGGGCAGACCAGCACCAGAAGACA
TTGACGTTACTCGGACGACAATCATCCATTTACTCACTAACCCTGGATGA
GTTCCAGCACACGCTGTGCGAGAGCGGCAAGAACTTCGGGTCAATGAACA
TGGATGAGTTCCTTACCAGCATCTGGAACGCCGAAGAAAACCAAGCCATC
AACTCATCTACCCAAGACAGTAATATCAACGCCAACAACGTTATTAACAA
TGCTATGAGCAATAACCATACGGTACAGCATCTTCCTGTCAATGAAACAA
CAGCGGCAACGACAGCCCACGGAAGTATAGTCAAGCAACCGAGCTTGTCA
AGGCAAGCCTCGCTTACGCTTCCGGCGCCGCTGTGTAGAAAGACGGTGGA
AGAAGTTTGGTCTGAGATACACAGAGGACAGCAAGGTGGGCACCAGCAGA
ATAGTAGAGTGACTGAGAATAATAGCAATAACAATAATAATGTGCGGAAT
CCTGAAGCTGCATCGCGGCAACCAACTTTTGGGGAGATGACACTGGAGGA
TTTCTTGATTAAAGCTGGTGTAGTGAGGGAACAGAACACCACGCCAGTGG
CGCAGCCTCCGCCGCAGCAGCAATTTGGGATATATCAGACTAATAATAAC
CCCGTGATGAGTCCTAATTTTGGCACCGGGCATGTCCTGGGACTGACTGG
TGTTAGTAATGGTGCTAG
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