GO241406

Overview
NameGO241406
Unique NameGO241406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:964..1414. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241406 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.988e-28
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 3
Query:    3 LXHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEXGYXKICRGRNVCGVDSMVSXIAA 188
            L HGVLLVGYGSAGYAPIRLKEKPYW+IKNSWGE+WGE GY KICRGRN+CGVDSMVS +AA
Sbjct:   29 LNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAA 90          
BLAST of GO241406 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.255e-26
Identity = 51/64 (79.69%), Postives = 57/64 (89.06%), Query Frame = 3
Query:    3 LXHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEXGYXKICRGRNVCGVDSMVSXIAAAV 194
            L HGVLLVGYG+AGYAP R KEKPYWIIKNSWGE+WGE G+ KIC+GRN+CGVDSMVS +AA V
Sbjct:  300 LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363          
BLAST of GO241406 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.640e-26
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 3
Query:    3 LXHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEXGYXKICRGRNVCGVDSMVSXIAAA 191
            L HGVLLVG+G   YAPIRLKEKPYWIIKNSWG++WGE GY KICRGRNVCGVDSMVS +AAA
Sbjct:  297 LDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAA 359          
BLAST of GO241406 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 3.092e-25
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 3
Query:    3 LXHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEXGYXKICRGRNVCGVDSMVSXIAA 188
            L HGVLLVGYGSAG++  RLKEKPYWIIKNSWGESWGE G+ KIC+GRN+CGVDS+VS +AA
Sbjct:  297 LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAA 358          
BLAST of GO241406 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.618e-24
Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 3
Query:    3 LXHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEXGYXKICRG---RNVCGVDSMVSXIAA 188
            L HGVLLVGYG++G+APIRLK+KPYWIIKNSWGE+WGE GY KICRG   RN CGVDSMVS ++A
Sbjct:  301 LDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSA 365          
BLAST of GO241406 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.715e-13
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 3
Query:    3 LXHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEXGYXKICRGRNVCGVDSMVSXIAAA 191
            L HGVL+VGYG + Y P   K  PYWI+KNSWG  WGE GY ++ RG N CGV  M +    A
Sbjct:  553 LDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 614          
BLAST of GO241406 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.002e-12
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 3
Query:    3 LXHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEXGYXKICRGRNVCGVDSMVS 176
            L HG+L+VGY +     I  K  PYWI+KNSWG  WGE GY  + RG+N CGV + VS
Sbjct:  284 LDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVS 339          
The following BLAST results are available for this feature:
BLAST of GO241406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PAPA5_CARPA2.988e-2887.10Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
RD19A_ARATH1.255e-2679.69Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP_PEA1.640e-2682.54Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
A494_ARATH3.092e-2579.03Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_MAIZE2.618e-2476.92Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CPR1_DROME2.715e-1353.97Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CYSP1_DICDI3.002e-1253.45Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
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Properties
Property NameValue
Genbank description54 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 137 5, mRNA sequence.