GO241384

Overview
NameGO241384
Unique NameGO241384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:776..1290. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.143e-17
Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 3
Query:   51 AAXLKT-KCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVMELRN--QDKXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSV 344
            AA LK  KCKSL D +T  E+DPGS R F   YY + ++ +G FQSD+AL TN     ++ +L N  + K F  FA+SM++MG + V  G  G IR +CSV
Sbjct:  226 AANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCSV 326          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 4.143e-17
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 3
Query:   54 AXLKTKCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVMELRN---QDKXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSVIN 350
            A L++KC SL D TT  E+DPGSF+ F   Y+    + +G F SD  LLTN   R  V        +D+ F +FA SM +MG + V  G QGEIR KC+V+N
Sbjct:  225 ARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.206e-16
Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 3
Query:   51 AAXLKTKCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVMELRNQD--KXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSVIN 350
            A  L+ KCK   DTTT  E+DPGSF+ F   Y+ +  + +G FQSDAALL N+  ++ V++  N D    F +F  SM +MG + V  G  GE+R KC ++N
Sbjct:  229 AVKLRGKCKP-TDTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.232e-16
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 3
Query:   51 AAXLKT-KCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVMEL--RNQDKXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSVINN 353
            AA LK+ KC SL D  T  E+DPGS + F   YY + ++ +G FQSD+AL TN    + +  +   +    F EFA+SM++MG +NV  G  G +R +CSV N+
Sbjct:  223 AANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVANS 326          

HSP 2 Score: 25.0238 bits (53), Expect = 1.232e-16
Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 2
Query:    2 NFPGNGDQDPSLXPRYGCIXKNQ 70
            NF G G QDP+L   Y    K++
Sbjct:  207 NFTGRGGQDPALDSEYAANLKSR 229          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.705e-16
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   69 KCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVMELR--NQDKXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSVIN 350
            +C S+AD TT  E+DPGS   F   YY + ++ +G F+SDAAL  N  A   V      ++ + F EF+ SM++MG + V  G  GEIR  C+ +N
Sbjct:  231 RCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          

HSP 2 Score: 26.5646 bits (57), Expect = 2.705e-16
Identity = 11/16 (68.75%), Postives = 11/16 (68.75%), Query Frame = 2
Query:    2 NFPGNGDQDPSLXPRY 49
            NF G GDQDPSL   Y
Sbjct:  208 NFTGVGDQDPSLDSEY 223          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.288e-14
Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 3
Query:   51 AAXLKTKCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVME--LRNQDKXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSVIN 350
            AA L+ KCK   DTTT  E+DPGSF+ F   Y+ +  + +G FQSDAALL N   R  V++    +    F +F  SM +MG   V  G  GEIR  C   N
Sbjct:  221 AAKLRKKCKP-TDTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 3
Query:   51 AAXLKTKCKSLAD-TTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVMELRN-QDKXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSVIN 350
            A  L  KC S  D TTT  + DP +   F + YY   + +KG FQ+D+AL+ +   R IV  L N Q+  F  + +S  +M  M V  G +GEIR  CS +N
Sbjct:  228 AQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11
Identity = 39/104 (37.50%), Postives = 52/104 (50.00%), Query Frame = 3
Query:   42 PDTAAXLKTKCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLTNKGARNIVMELRNQDKXF-XEFAQSMKRMGAMNVXXGXQGEIRXKCSVIN 350
            P   A L+T+C    D +   +LD GS   + + YY+     +G  QSD  L T+   R IV +L      F  EFA+SM RM  + V  G  GEIR  CS +N
Sbjct:  225 PTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
BLAST of GO241384 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 3
Query:   42 PDT------AAXLKTKCKSLADTTTTAELDPGSFRKFXSHYYDIXIENKGXFQSDAALLT-NKGARNIVMEL-RNQDKXFXEFAQSMKRMGAMNVXXGXQGEIRXKCSVINN 353
            PDT      AA L+ +C         +ELD  S  +F + Y+   IEN G   SD  L + N+ +R +V +   +Q++ F +FA+SM +MG ++   G  GEIR KC  INN
Sbjct:  225 PDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEIRKKCRKINN 336          
The following BLAST results are available for this feature:
BLAST of GO241384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PER30_ARATH4.143e-1746.53Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_ORYSJ4.143e-1745.10Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER56_ARATH1.206e-1643.14Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER3_ARATH1.232e-1642.31Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER39_ARATH2.705e-1640.63Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER27_ARATH4.288e-1443.14Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER18_ARATH6.845e-1239.22Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER71_ARATH9.885e-1137.50Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER14_ARATH9.885e-1136.61Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
back to top
Properties
Property NameValue
Genbank description32 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 114 5, mRNA sequence.