GO241381

Overview
NameGO241381
Unique NameGO241381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7517 contig Csv1_Contig7517:398..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241381 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5)

HSP 1 Score: 73.1738 bits (178), Expect = 1.301e-12
Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 3
Query:   66 SVYINVFIXSFAELPGLXTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMXXMGTFIIANIFAPEIYPTXMRSTGAGVAYAVGRIGGMVCPLVA 392
            S Y ++   + AE PGL    L+++  GRK +M + +    IF   L        +T L+  AR    G F  A ++ PE+YPT +R+ G G   A+ RIG +V P +A
Sbjct:  370 SDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIA 478          
BLAST of GO241381 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12
Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 3
Query:   72 YINVFIXSFAELPGLXTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMXXMGTFIIANIFAPEIYPTXMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 410
            Y ++   + +E PGL     ++DRVGRK +M I FI      L L       +LT  L  AR    G F  A ++ PE+YPT  R+ G G    + R+G ++ P +A  ++ S
Sbjct:  373 YTDLLWTTLSEFPGLLVTLWIIDRVGRKKTMAICFIIFSFSALLLFLCVGRNVLTVFLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
BLAST of GO241381 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.944e-12
Identity = 45/147 (30.61%), Postives = 70/147 (47.62%), Query Frame = 3
Query:   72 YINVFIXSFAELPGLXTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMXXMGTFIIANIFAPEIYPTXMRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTXXXXXXXXXXXXXXXXXXXXPFETKGKEL 509
            Y+++   + +E PG+     ++DR+GRK +M + FI   +  L L       +LT LL  AR    G F  A ++ PE+YPT  R+ G G    + R+G ++ P +A V L +S + T                    P ETKG+ L
Sbjct:  373 YMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLT--LAVYSGCCLLAGVASCFLPIETKGRAL 517          
BLAST of GO241381 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12
Identity = 44/147 (29.93%), Postives = 70/147 (47.62%), Query Frame = 3
Query:   72 YINVFIXSFAELPGLXTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMXXMGTFIIANIFAPEIYPTXMRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTXXXXXXXXXXXXXXXXXXXXPFETKGKEL 509
            Y+++   + +E PG+     ++DR+GRK +M + F+   +  L L       +LT LL  AR    G F  A ++ PE+YPT  R+ G G    + R+G ++ P +A V L +S + T                    P ETKG+ L
Sbjct:  373 YMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLT--LAVYSGCCLLAALASCFLPIETKGRAL 517          
BLAST of GO241381 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 3
Query:   72 YINVFIXSFAELPGLXTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMXXMGTFIIANIFAPEIYPTXMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 410
            Y+++   + +E PG+     ++DR+GRK +M + F+      L L       +LT LL  AR    G F  A ++ PE+YPT  R+ G G    + R+G ++ P +A  ++ S
Sbjct:  373 YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
BLAST of GO241381 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 3
Query:   72 YINVFIXSFAELPGLXTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMXXMGTFIIANIFAPEIYPTXMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 410
            Y+++   + +E PG+     ++DR+GRK +M + F+      L L       +LT LL  AR    G F  A ++ PE+YPT  R+ G G    + R+G ++ P +A  ++ S
Sbjct:  373 YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
BLAST of GO241381 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 3
Query:   72 YINVFIXSFAELPGLXTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMXXMGTFIIANIFAPEIYPTXMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 410
            Y+++   + +E PG+     ++DR+GRK +M + F+      L L       +LT LL  AR    G F  A ++ PE+YPT  R+ G G    + R+G ++ P +A  ++ S
Sbjct:  373 YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
The following BLAST results are available for this feature:
BLAST of GO241381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
YOU1_CAEEL1.301e-1233.94Putative transporter ZK637.1 OS=Caenorhabditis ele... [more]
SVOP_XENLA2.219e-1233.63Synaptic vesicle 2-related protein OS=Xenopus laev... [more]
SVOP_MOUSE4.944e-1230.61Synaptic vesicle 2-related protein OS=Mus musculus... [more]
SVOP_RAT6.457e-1229.93Synaptic vesicle 2-related protein OS=Rattus norve... [more]
SVOP_PONAB8.433e-1230.97Synaptic vesicle 2-related protein OS=Pongo abelii... [more]
SVOP_HUMAN8.433e-1230.97Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
SVOP_BOVIN8.433e-1230.97Synaptic vesicle 2-related protein OS=Bos taurus G... [more]
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Properties
Property NameValue
Genbank description29 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 111 5, mRNA sequence.