DY257103

Overview
NameDY257103
Unique NameDY257103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1258
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY257103 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.610e-15
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 3 
Query:  246 RVDALNKKNKIYYYTVIEGEGDANIPTIDHVSYESKVVGTPDGRSKTTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 515
            RVD ++K N  Y YT+IEG  DA    I++++Y+ K+V +PDG S       ++ K   EIKEEQVK G EK  G+FK +EAY LANP+A
Sbjct:   71 RVDGIDKDNLSYSYTLIEG--DALSDVIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDA 158
[Close]
BLAST of DY257103 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.711e-12
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 3 
Query:  246 RVDALNKKNKIYYYTVIEGEGDANIPTIDHVSYESKVVGTPDGRSKTTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 515
            ++D+++K+N  Y YT+IEG  DA   T++ +SYE+K+V +P G S       ++ K   EIKEE VK G EK   +FK +E Y   +P+A
Sbjct:   71 KIDSIDKENYSYSYTLIEG--DALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDA 158
[Close]
BLAST of DY257103 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.329e-12
Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = 3 
Query:  246 RVDALNKKNKIYYYTVIEGEGDANIPTIDHVSYESKVVGTPDGRSKTTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 512
            +VD ++  N  Y Y+++ G G  +  T++ +S+ESK+   PDG S   + +K++ K  A   EE++KGG  +  G+FKALE Y LANP+
Sbjct:   70 KVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPD 156
[Close]
BLAST of DY257103 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 9.139e-11
Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 3 
Query:  246 RVDALNKKNKIYYYTVIEGEGDANIPTIDHVSYESKVVGTPDGRSKTTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 515
            ++D++++ N  Y YT+IEG  DA   TI+ VSYE+K+V +  G S    +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:   71 KIDSVDEANYSYAYTLIEG--DALTDTIEKVSYETKLVASGSG-SIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDA 157
The following BLAST results are available for this feature:
BLAST of DY257103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PRU1_PRUAR1.610e-1548.89Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV3.711e-1241.11Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
PR1_MEDSA6.329e-1239.33Class-10 pathogenesis-related protein 1 OS=Medicag... [more]
MAL12_MALDO9.139e-1142.22Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK1AB07FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257103 ID=DY257103; Name=DY257103; organism=Citrus sinensis; type=EST; length=1258bp
GCAGTTGTTGTTTTGAGAATAACAAACATATTAACCGTTTGTTGATTGTG
GAATTTTCTGGTATAGGTGGCTATATCATTGTCTTGGATGGATTGTAGTT
TAATCTTCCCATGGCCAGATAAATATATTTGATGTTTGTGATGTGCTCAT
TTTGGTTTAATTATCCGGCTTGGACCTCTGAATTGCTGGTTCTTATTGTT
ATGTCCTGTTCCGATGAAAGAGTATAATGTTACTGCTTTATTTGTAGAGT
TGATGCATTGAACAAAAAAAACAAGATATACTATTACACGGTAATTGAAG
GTGAGGGTGATGCTAACATCCCTACTATTGATCATGTTTCTTATGAGAGT
AAGGTTGTGGGCACCCCTGACGGACGAAGCAAGACCACCGTTGTTATCAA
GTTCTATCCCAAACCAGGTGCCGAGATTAAGGAAGAGCAGGTTAAGGGAG
GCTTGGAAAAGGAGAAGGGAATTTTTAAGGCTCTGGAAGCCTATGCCTTG
GCAAACCCCAATGCCGTATAAGCTCTTACGTCAACACTTCACCGCACTTG
CGTCGCCTTTGTTGCAACATTATGAATAATCATGTTTATGGCTTCCGTAT
GTCGTGTCTCTTTGTTTTCAGATATGCCAATTTATATAATTGGCTTTTGG
CTAAATAAAAAAAAAAAAGACTTTGCTTTTCCCTTTCCCTAAAAATAGGG
TGCTAAAGAGCGACTCCCCACTAATGACAAAAGAACCCGGGAAACGGTAA
AAGAATATCCACCCCCCTCTTTTCTTGTAAAGGGGGATTTAAAAAAACTC
TGTTTTAAATTTGGCCACAACCAAGGCCAATTTTAACAAAATAACCCTCA
TTTCCCCCACCCCACCACCCCCCCTAGGGGGGACATTTCTTCGGGCTTTC
GATTTCTGCGGCCTCCAAGCCCGTGCCTCTCATCTAAATATATTTATCCC
AACAAAGAAAAACTCCCATCTTGTTGGCGAAAGCCTTTTACGCACTAGCA
TAGGGTCGCTTAATCTTTTCTAGCCGGAGAAAGAAAAAATCTTTTAGAAG
AGCCCCACCAGGGAGAGAAAAAACACACTCTCCAGTCTAGCATCACTCCT
TACACGTTAGGACGTCATTCTGTTATCACCCCCTGCTCTACCATCTCTCG
CCAACGCACCTTCAACATAATAATATGTTCTACTCCTCCCCTTTTACAAT
CATATAGAAAATTTGTTAATCCACGGCACTAATACTCATACTTTCACCTC
AACAATTC
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