DT214584

Overview
NameDT214584
Unique NameDT214584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12308 contig Csv1_Contig12308:85..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODB2_HUMAN (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DBT PE=1 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 2.265e-59
Identity = 113/232 (48.71%), Postives = 157/232 (67.67%), Query Frame = -3
Query:   80 DKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQMR 775
            DKT P++GFQ+ MVKTMS A KIPHF Y +EI+   LVKL+   +       IK +F+P  +K+ S+ + ++P +N+  +E    +  K SHNIGIAM T+ GL VPN+KNVQ  SI +I  EL+RLQ+L    +L+  D +GGT TLSNIG+IGG F  P++  PEVAI A+G I+ +PR +  G VY + IM V+  ADHRV+DGAT+++F N WK  +ENP  +LL ++
Sbjct:  251 DKTEPIKGFQKAMVKTMSAALKIPHFGYCDEIDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQICSIFDIATELNRLQKLGSVGQLSTTDLTGGTFTLSNIGSIGGTFAKPVIMPPEVAIGALGSIKAIPRFNQKGEVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDLK 482          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODB2_MOUSE (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dbt PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.769e-57
Identity = 113/250 (45.20%), Postives = 162/250 (64.80%), Query Frame = -3
Query:   80 EEETYPQTFAEVKWYPD-DKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQMR 826
            ++ T+P   A+   +   D+T P+ GFQ+ MVKTMS A KIPHF Y +EI+   LVKL+   +       IK +F+P  +K+ S+ + ++P +N+  +E    +  K SHNIGIAM T+ GL VPN+KNVQ  S+  I  EL+RLQ+L    +L   D +GGT TLSNIG+IGG +  P++  PEVAI A+G I+ +PR    G+VY + IM V+  ADHRV+DGAT+++F N WK  +ENP  +LL ++
Sbjct:  233 KDRTFPTPIAKPPVFTGKDRTEPVTGFQKAMVKTMSAALKIPHFGYCDEIDLTQLVKLREELKPVALARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTELGLIVPNVKNVQVRSVFGIGMELNRLQKLGSSGQLGTTDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFDQKGDVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDLK 482          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODB2_BOVIN (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Bos taurus GN=DBT PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 1.052e-56
Identity = 109/232 (46.98%), Postives = 155/232 (66.81%), Query Frame = -3
Query:   80 DKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQMR 775
            D+T P++GF + MVKTMS A KIPHF Y +E++   LVKL+   +       IK +F+P  +K+ S+ + ++P +N+  +E    +  K SHNIGIAM T+ GL VPN+KNVQ  SI EI  EL+RLQ+L    +L+  D  GGT TLSNIG+IGG +  P++  PEVAI A+G I+ +PR ++ G V  + IM V+  ADHR++DGATV++F N WK  +ENP  +LL ++
Sbjct:  251 DRTEPVKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDLK 482          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAAW (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MW2) GN=pdhC PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   86 RGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 757
            R   + MV +   A   PH   ++EI+  AL   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  210 RAIAKAMVNSKHTA---PHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAAU (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus GN=pdhC PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   86 RGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 757
            R   + MV +   A   PH   ++EI+  AL   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  210 RAIAKAMVNSKHTA---PHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAAS (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MSSA476) GN=pdhC PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   86 RGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 757
            R   + MV +   A   PH   ++EI+  AL   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  210 RAIAKAMVNSKHTA---PHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAAR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MRSA252) GN=pdhC PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   86 RGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 757
            R   + MV +   A   PH   ++EI+  AL   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  210 RAIAKAMVNSKHTA---PHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAAN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain N315) GN=pdhC PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   86 RGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 757
            R   + MV +   A   PH   ++EI+  AL   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  210 RAIAKAMVNSKHTA---PHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAAM (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   86 RGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 757
            R   + MV +   A   PH   ++EI+  AL   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  210 RAIAKAMVNSKHTA---PHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAAC (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain COL) GN=pdhC PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = -3
Query:   86 RGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 757
            R   + MV +   A   PH   ++EI+  AL   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  210 RAIAKAMVNSKHTA---PHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429          
The following BLAST results are available for this feature:
BLAST of DT214584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
ODB2_HUMAN2.265e-5948.71Lipoamide acyltransferase component of branched-ch... [more]
ODB2_MOUSE2.769e-5745.20Lipoamide acyltransferase component of branched-ch... [more]
ODB2_BOVIN1.052e-5646.98Lipoamide acyltransferase component of branched-ch... [more]
ODP2_STAAW2.604e-3938.84Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAU2.604e-3938.84Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAS2.604e-3938.84Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAR2.604e-3938.84Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAN2.604e-3938.84Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAM2.604e-3938.84Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAC2.604e-3938.84Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I06_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0002b_E03_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214584 ID=DT214584; Name=DT214584; organism=Citrus sinensis; type=EST; length=843bp
ACATACAATAATATTATTATTTTGCGTGTAATTGAGAGTTATTGAAAAGT
GTAAGCTGAGGAGCAATGAAGATGCATCATCTCATTTGCAACAGAAGTAA
CTCAGGGTTTTCGATTAACTGTTTCCACTCATTGCAGAACTTTGCGACAG
TTGCTCCATCCAAAACTCTGTGATCAGCACCTATATTAACGGTCATAATT
GGTGAGGGGTACACATTTCCATCGTCTGAAAGACGTGGAACTTTCTCAAT
TCGGCCCATTGCAATGATGGCAACTTCAGGCAAGTTGAGAAGTGGCGCAC
CAAATTTTCCGCCGATTGCTCCAATATTGCTGAGAGTTATTGTTCCACCA
GAATTATCAGCTGGATTAAGCTCGTTATCCTTTGCTAATTGTTGTAACCG
TGACAGTTCCTTTGTTATCTCCAAGATGGAAAGGGACTGAACATTCTTAA
TGTTAGGTACAGCTAGACCATGTTGAGTAGCCATTGCAATTCCAATATTG
TGGGAACCTTTAAGAATGACCTCAAGTGACTCCTCATTGAAGCAACTATT
CATGAAGGGATATTTGCTCATGGCCATCGAAAGTGACTTTATCAATGATG
GAAGGAAAGTATGCTTAATGTTTGGGTCAGAATTATTATTTTGAAAAGAT
GCCTTAAGCTTCACAAGAGCATCACAATTTATCTCTTCTACATAATGAAA
ATGCGGTATTTTTGCAGCCATGGACATTGTTTTGACCATTGTTCTCTGGA
AACCCCTCAAGGGAACTGTCTTATCATCAGGGTACCATTTAACTTCAGCA
AATGTTTGTGGGTAGGTCTCTTCTTCTCCTAAAAGCTGCTCTC
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