DT214556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214556 vs. ExPASy Swiss-Prot
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.698e-47 Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = -1 Query: 304 PLCFPPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNLDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKVMTAPRAFKDLAPSSCQVVY 705 P FPP G VYD ++ TW MS GMKEGWTG+S+V+ +LFVISEHGD PMK Y DDDTWRYV G+K E M RPFAV G + +++VV+SG+NVA GRV E QNG S EW+++++P++ +P+SC V+Y Sbjct: 238 PFMFPPMGQVYDSDEGTWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASGINVAEGRVSEGQNGDFSVEWRMVSSPKSSIQFSPASCHVLY 371 HSP 2 Score: 38.5058 bits (88), Expect = 6.698e-47 Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = -3 Query: 683 MGSKMYVTEGWTWPFMFSPKG 745 +G +M VTEGW WPFMF P G Sbjct: 225 IGKEMCVTEGWAWPFMFPPMG 245
BLAST of DT214556 vs. ExPASy Swiss-Prot
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana GN=At1g30090 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.587e-28 Identity = 52/135 (38.52%), Postives = 83/135 (61.48%), Query Frame = -1 Query: 301 PLCFPPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNLDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKVMTAPRAFKDLAPSSCQVVYA 705 P PRG VYD D W MS G++EGWTG S+V+ +LF++SE MK Y+ D+W + G + P E + RPFAVN ++YVV L++A+G +++ +N + W+V+ +P + D+ PS+ Q+++A Sbjct: 266 PFFVSPRGQVYDPRTDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELP-EQICRPFAVNCYGNRVYVVGRNLHLAVGNIWQSEN-KFAVRWEVVESPERYADITPSNSQILFA 398 HSP 2 Score: 35.4242 bits (80), Expect = 1.587e-28 Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = -3 Query: 683 MGSKMYVTEGWTWPFMFSPKG 745 + K+ VTEGW WPF SP+G Sbjct: 253 LNGKLLVTEGWLWPFFVSPRG 273 The following BLAST results are available for this feature:
BLAST of DT214556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DT214556 ID=DT214556; Name=DT214556; organism=Citrus sinensis; type=EST; length=747bpback to top |