DT214533

Overview
NameDT214533
Unique NameDT214533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-4cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD_PRUAR (Adenylate kinase OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32
Identity = 64/84 (76.19%), Postives = 77/84 (91.67%), Query Frame = -2
Query:  492 MGAEPDIVLFFDCPEEEMVNRVLNRNEGRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRAVFAAL 743
            +GAEPD+VLFFDCPE+EMV RVLNRN+GRVDDNIDT++KRL++F  LN PVINYY++RGKL+ INAVGTVDEIFE+VR +FA L
Sbjct:  146 IGAEPDVVLFFDCPEQEMVKRVLNRNQGRVDDNIDTIKKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKVRPIFAPL 229          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: UMPK_ARATH (Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = -2
Query:  498 EPDIVLFFDCPEEEMVNRVLNRNEGRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRAVFA 734
            EP  VLFFDCPEEEM  R+L RN+GR DDNI+T+RKR +VF   +LPVI+YY  +GK+  INA   ++ +FE+V+A+F+
Sbjct:  116 EPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEVKAIFS 194          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD1_CAEEL (Probable adenylate kinase isoenzyme F38B2.4 OS=Caenorhabditis elegans GN=F38B2.4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = -2
Query:  507 EPDIVLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRA 734
            E  +VLFFD  EE +V R+L+R +  GR DDN DT++KRL  F     PV++YY  +GKL  INA G+VD+IF  V A
Sbjct:  124 EAKLVLFFDVAEETLVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGSVDDIFAVVVA 201          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD1_CHICK (Adenylate kinase isoenzyme 1 OS=Gallus gallus GN=AK1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.736e-12
Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = -2
Query:  513 AEPDIVLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQV 737
            A P ++L+ D  +E MV R+L R E  GRVDDN +T++KRL+ +     PVI +Y  RG +  +NA GTVDE+F+QV
Sbjct:  111 APPTLLLYVDAGKETMVKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYKGRGIVRQLNAEGTVDEVFQQV 187          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD_DEIRA (Adenylate kinase OS=Deinococcus radiodurans GN=adk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.961e-12
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = -2
Query:  513 LILT*MGAEPDIVLFFDCPEEEMVNRVLNRN-----EGRV---DDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQV 758
            L+L  +GA    V   + P++ +++R+++R      EGR    DDN +T RKR QV++    P+I+YYARRG LYT++ +GT DE++E++
Sbjct:  103 LLLEELGAPVSAVPLLEVPDQVLIDRIVDRGRQAVAEGRAPRADDNEETARKRQQVYREQTQPLIDYYARRGHLYTVDGLGTPDEVYERI 192          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD1_RAT (Adenylate kinase isoenzyme 1 OS=Rattus norvegicus GN=Ak1 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = -2
Query:  489 AEPDIVLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRAVFAALK 737
            A+P ++L+ D   E M  R+L R E  GRVDDN +T++KRL+ +     PVI++Y +RG +  +NA G+VD +F QV     +LK
Sbjct:  110 AQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVISFYDKRGIVRKVNAEGSVDTVFSQVCTYLDSLK 194          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD1_BOVIN (Adenylate kinase isoenzyme 1 OS=Bos taurus GN=AK1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = -2
Query:  489 AEPDIVLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRAVFAALK 737
            A+P ++L+ D   E M  R+L R E  GRVDDN +T++KRL+ +     PVI +Y +RG +  +NA G+VD +F QV     ALK
Sbjct:  110 AQPTLLLYVDAGPETMTKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQVCTHLDALK 194          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD1_RABIT (Adenylate kinase isoenzyme 1 OS=Oryctolagus cuniculus GN=AK1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = -2
Query:  489 AEPDIVLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRAVFAALK 737
            A+P ++L+ D   E M  R+L R E  GRVDDN +T++KRL+ +     PVI +Y +RG +  +NA G+VD +F QV     ALK
Sbjct:  110 AQPTLLLYVDAGPETMQKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQVCTHLDALK 194          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD_THET8 (Adenylate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=adk PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = -2
Query:  507 VLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRA 722
            V+  + PEEE+V R+L R E  GR DDN +TVR+RL+V++    P++ YY  RG L  ++ +GT DE++ ++RA
Sbjct:  109 VVLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEARGVLKRVDGLGTPDEVYARIRA 182          
BLAST of DT214533 vs. ExPASy Swiss-Prot
Match: KAD_THET2 (Adenylate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=adk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = -2
Query:  507 VLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYARRGKLYTINAVGTVDEIFEQVRA 722
            V+  + PEEE+V R+L R E  GR DDN +TVR+RL+V++    P++ YY  RG L  ++ +GT DE++ ++RA
Sbjct:  109 VVLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEARGVLKRVDGLGTPDEVYARIRA 182          
The following BLAST results are available for this feature:
BLAST of DT214533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
KAD_PRUAR1.156e-3276.19Adenylate kinase OS=Prunus armeniaca PE=2 SV=1[more]
UMPK_ARATH7.774e-2156.96Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 P... [more]
KAD1_CAEEL7.048e-1451.28Probable adenylate kinase isoenzyme F38B2.4 OS=Cae... [more]
KAD1_CHICK1.736e-1248.05Adenylate kinase isoenzyme 1 OS=Gallus gallus GN=A... [more]
KAD_DEIRA2.961e-1240.00Adenylate kinase OS=Deinococcus radiodurans GN=adk... [more]
KAD1_RAT5.051e-1242.35Adenylate kinase isoenzyme 1 OS=Rattus norvegicus ... [more]
KAD1_BOVIN5.051e-1243.53Adenylate kinase isoenzyme 1 OS=Bos taurus GN=AK1 ... [more]
KAD1_RABIT8.616e-1243.53Adenylate kinase isoenzyme 1 OS=Oryctolagus cunicu... [more]
KAD_THET81.125e-1144.59Adenylate kinase OS=Thermus thermophilus (strain H... [more]
KAD_THET21.125e-1144.59Adenylate kinase OS=Thermus thermophilus (strain H... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_8C08_b2 Parent Washington Navel Orange Callus cDNA Library UCRCS08-4 Citrus sinensis cDNA clone UCRCS08-8C08-F16-1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214533 ID=DT214533; Name=DT214533; organism=Citrus sinensis; type=EST; length=888bp
CTTGTTCTGATGACACTAGCTGCCAAAACCATTGTCACAAATCCTTTAGT
GACAGATTGTAATGTAAATGACCGAAAACGAAATTGCAGAGAATATAATT
GAATATTCAGAGTCATTGACTGAATGATACAGCTCAAACCCCAGAGTTTT
TCCTTTTTCTTCACCTTGAAAGAACGGTTGTTGAAATACAACAGTGCACT
AGTTTACTTTCAGAAACAAAGTGCTTGAACAGAGACAAAGAAATTGTCAT
CCCTGGTGAGGTAAATGCCGGCCTCCACAGCATCTCAGATTCCATGCCAG
GAATATCCAGTCCTAGTGAAGGCTGTCATTATCCAATTAATCATGTGATC
GTATCAGAAAGACACGGCAACTTCCATCTGCCCATGAAATACTAGCTGCA
GAACAAGACCAACTCTACTCAATGCCAAGAATATTCCATGTTTTGTGCAA
CTCTTTGTTCGTATAATCAAGGATCATTCTGTCGCCAGCTTGAGTGCAGC
AAAAACTGCACGAACTTGTTCAAAAATTTCATCTACTGTTCCCACTGCAT
TGATCGTATAAAGCTTTCCCCTCCTTGCATAGTAATTGATAACAGGAAGA
TTCAATGCTTTAAACACTTGGAGACGTTTCCGGACTGTGTCAATGTTATC
ATCAACTCGACCCTCATTGCGGTTCAGCACTCGATTCACCATCTCTTCTT
CAGGGCAATCGAAGAAAAGAACAATATCTGGTTCTGCTCCCATCTATGTC
AGAATCAAGAATATTTATTTTCAAGAAAAAAATCATAAGAAAAGGAATAA
AAATCAAATGGTCCAAATCCAATAATGGATTTCTGACTGTTCTAATTTTG
GTTTTTTGGACAGGATTTAGTACTGCTTCAAATCTCTA
back to top