DT214522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214522 vs. ExPASy Swiss-Prot
Match: S2540_HUMAN (Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.280e-12 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = -3 Query: 193 CTCAVPGSEP-APECNRYKGTLDVFYKVVRQEGFTRLWRGTYASLALSVPTVGIYLSCYDSFRNLMENFTTGNAPLLTPYVPLVAGSVARSLACISCYPIKLARTQMQ 513 C C G++ + ++GTLD F+K++R EG LW G +L ++VP IY +CYD L+ + N +P+VAG VAR A P++L RT+MQ Sbjct: 67 CVCEEGGNKLWYKKPGNFQGTLDAFFKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLSALLRSKLGENETC----IPIVAGIVARFGAVTVISPLELIRTKMQ 170 HSP 2 Score: 23.0978 bits (48), Expect = 1.280e-12 Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = -2 Query: 521 IVSAVIVNPLDVAKMLPDMRNS 586 I+++VIV PLDV K+ +N+ Sbjct: 27 ILTSVIVTPLDVVKIRLQAQNN 48
BLAST of DT214522 vs. ExPASy Swiss-Prot
Match: S2540_BOVIN (Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = -3 Query: 193 CTCAVPGSEP-APECNRYKGTLDVFYKVVRQEGFTRLWRGTYASLALSVPTVGIYLSCYDSFRNLMENFTTGNAPLLTPYVPLVAGSVARSLACISCYPIKLARTQMQ 513 C C G++ + ++GTLD F K++R EG LW G +L ++VP IY +CYD L+ + N +P+VAG VAR A P++L RT+MQ Sbjct: 67 CVCEEEGNKAWYKKPGHFQGTLDAFLKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLTALLRSKLGEN----ESRIPIVAGIVARLGAVTVISPLELIRTKMQ 170
BLAST of DT214522 vs. ExPASy Swiss-Prot
Match: S2539_RAT (Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 193 RYKGTLDVFYKVVRQEGFTRLWRGTYASLALSVPTVGIYLSCYDSFRNLMENFTTGNAPLLTPYVPLVAGSVARSLACISCYPIKLARTQMQ 468 R+ GTLD F K+VR EG LW G A+L ++VP IY + YD ++ F G + Y P+VAG++AR P++L RT++Q Sbjct: 103 RFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQ----LKAFLCGQSLTSDLYAPMVAGALARMGTVTVVSPLELVRTKLQ 190
BLAST of DT214522 vs. ExPASy Swiss-Prot
Match: S2539_MOUSE (Solute carrier family 25 member 39 OS=Mus musculus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 193 RYKGTLDVFYKVVRQEGFTRLWRGTYASLALSVPTVGIYLSCYDSFRNLMENFTTGNAPLLTPYVPLVAGSVARSLACISCYPIKLARTQMQ 468 R+ GTLD F K+VR EG LW G A+L ++VP IY + YD ++ F G + Y P+VAG++AR P++L RT++Q Sbjct: 103 RFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQ----LKAFLCGQSLTSDLYAPMVAGALARMGTVTVVSPLELVRTKLQ 190
BLAST of DT214522 vs. ExPASy Swiss-Prot
Match: S2539_HUMAN (Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 193 RYKGTLDVFYKVVRQEGFTRLWRGTYASLALSVPTVGIYLSCYDSFRNLMENFTTGNAPLLTPYVPLVAGSVARSLACISCYPIKLARTQMQ 468 R+ GT+D F K+VR EG LW G A+L ++VP IY + YD ++ F G A Y P+VAG++AR P++L RT++Q Sbjct: 103 RFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQ----LKAFLCGRALTSDLYAPMVAGALARLGTVTVISPLELMRTKLQ 190
BLAST of DT214522 vs. ExPASy Swiss-Prot
Match: S2539_BOVIN (Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = -3 Query: 193 RYKGTLDVFYKVVRQEGFTRLWRGTYASLALSVPTVGIYLSCYDSFRNLMENFTTGNAPLLTPYVPLVAGSVARSLACISCYPIKLARTQMQ 468 R+ GT+D F K+VR EG LW G A+L ++VP Y + YD ++ F G A Y P+VAG++AR P++L RT++Q Sbjct: 103 RFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAAYFTAYDQ----LKAFLCGRALTSDLYAPMVAGALARLGTVTVISPLELVRTKLQ 190 The following BLAST results are available for this feature:
BLAST of DT214522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DT214522 ID=DT214522; Name=DT214522; organism=Citrus sinensis; type=EST; length=857bpback to top |