FC871134

Overview
NameFC871134
Unique NameFC871134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1125 contig Csv1_Contig1125:30..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.976e-78
Identity = 133/200 (66.50%), Postives = 156/200 (78.00%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVS-KREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            NVAN+VT  FF+GIKNQA + C GK+FYTR AFL+A  AYP F  G  EV  KREIAAFFAHVTHETGHFCYI EINKSN YCD  N+Q+PC  G+ YYGRGP+Q++ N NYG AG+ IGF+GL  P  VA+D V++FKTA+WFWM NVH V+ QGFGATI+ INGA+EC G  PAQ+ AR+GYYK YC +  V PGPNL
Sbjct:   79 NVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNL 278          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.531e-77
Identity = 134/202 (66.34%), Postives = 162/202 (80.20%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLF 680
            +V ++VT  FF+GIKNQA   CAGKSFYTR +FLNAA++Y  F +  + + SKREIAAFFAHVTHETGH CYI EIN +N  YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AGK IGFDGLR P+ VA+DP +SFKTA+WFWM NVH V++QGFGATI+ INGA+EC GK P  V AR+ YYKDYC +FGV+PG NL+
Sbjct:   83 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLY 284          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.112e-75
Identity = 128/200 (64.00%), Postives = 153/200 (76.50%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVS-KREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            NVA++VT  FF+GIKNQA + C GK+FYTR AFL+A K YP F  G  +V  KREIAAFFAH THETGHFCYI EINKSN YCD   +Q+PC  G+ YYGRGP+Q++ N NYG AG+AIGFDGL  P  VA+D VV+FK A+WFWM +VH VV QGFGAT + +  A+ECGG  PAQ+ AR+GYY+ YC + GV PGPNL
Sbjct:   68 NVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNL 267          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 9.288e-75
Identity = 131/202 (64.85%), Postives = 158/202 (78.22%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLF 680
            +V ++VT  FF+GIKNQA   CAGK+FYTR +FLNAA +Y  F    + + SKREIAAFFAHVTHETGH CYI EIN ++  YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AG+ IGFDGLR P+ VA+DP +SFKTA+WFWM NVH V+ QGFGATI+ INGA+EC GK P  V AR+ YYKDYC +FGV PG NL+
Sbjct:   86 SVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLY 287          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.937e-68
Identity = 126/200 (63.00%), Postives = 153/200 (76.50%), Query Frame = 3
Query:   87 ANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQN-KQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            A+I+T  F +GI +QA + CAGK+FYTRDAFL+A  +Y  FG  GS + SKREIAA FAH THETGHFCYIEEI+ +++ YCDE++  QYPC   K Y+GRGPIQL+ N NYG AG A  FDGL APETV+ D VVSFKTA+W+WM +V PV+NQGFGATI+ INGA+EC G  P  VQAR+ YY +YC + GVA G NL
Sbjct:   69 ADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNL 268          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 6.447e-68
Identity = 120/200 (60.00%), Postives = 150/200 (75.00%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +V +IVT  FF+GI NQA   CAGK+FYTRD+F+NAA  +P F +    V++REIA  FAH THETGHFCYIEEIN ++R YCDE N+QYPC PGK Y+GRGPIQL+ N NYGA G+++  + L  PE V+ +P V+F+T +WFWM +V PV+NQGFGATI+ ING +EC G     V ARI YY+DYC + GV PGPNL
Sbjct:   71 SVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANS---VTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNL 266          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.881e-66
Identity = 121/203 (59.61%), Postives = 149/203 (73.40%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGHFCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHP--VVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +VA+IVTP+FF  +  QA   CA K FYTRDAFL AA  YP FG +GS + SKREIAAFFAH  HET  FCYIEEI+  S  YCDE + Q+PC+ GK YYGRGP+Q++ N NYG AG++IGFDGL  P+ VA+ PV++F+TA+W+W  NVH   V  QGFGATI+ INGA+EC GK P  V  R+ YY+ +C +FGV PG NL
Sbjct:   67 SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNL 269          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.391e-62
Identity = 122/203 (60.10%), Postives = 148/203 (72.91%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHFCYIEEINKS--NRYCDEQNK-QYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +V++IV+  FFDGI  QAAASC GK+FYTR AFL+A    P+FG+ GS + +KREIAAFFAH++HET + C+IEE +    + YCD+    QYPC  GK YYGRGP+QL+ N NY  AG+AIGFDGL  PE VA D   SFK A+WFWMTNVH V+NQGFGAT + INGA+EC G+   Q   RI +YK YC  FGVAPG NL
Sbjct:   86 SVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNL 286          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.048e-62
Identity = 119/204 (58.33%), Postives = 151/204 (74.02%), Query Frame = 3
Query:   84 VANIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHFCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWM-TNVHPVV---NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            V++IVT +F+DGI +QAAA+C GKSFYTR  FL A  AYP FG+  + E  KREIAA+FAHVTHETGH CYIEE +  +N YC E ++QYPC P K Y+GRGP+QL+ N NY  AGK + FDGL  P+ V +DP++SFKT++WFW+   V  V+   NQGFGATI+ ING  EC G   AQ+ AR+GYY++YC + GV+PG NL
Sbjct:   46 VSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQE-SQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNL 248          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44
Identity = 97/226 (42.92%), Postives = 129/226 (57.08%), Query Frame = 3
Query:  105 QFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHP-------VVNQ--------------GFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            QF D +K++   +C  + FYT DAF+NAAK++P FG+ G     K+EIAAFF   +HET               +C+ +E N S+ YC   + ++PC  GK YYGRGP+QL+ N NYG  G+AIG D L  P+ V+ DPV++FK A+WFWMT   P       +V Q              G+G     ING +ECG  Q A+V  RIG+Y+ YCN  GV PG NL
Sbjct:   79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSP-SAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNL 303          
The following BLAST results are available for this feature:
BLAST of FC871134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIA_MAIZE8.976e-7866.50Endochitinase A OS=Zea mays PE=1 SV=1[more]
CHI4_ORYSJ1.531e-7766.34Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_MAIZE7.112e-7564.00Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHI5_ORYSJ9.288e-7564.85Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI4_PHAVU4.937e-6863.00Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE... [more]
CHI4_BRANA6.447e-6860.00Basic endochitinase CHB4 OS=Brassica napus PE=1 SV... [more]
CHI6_ORYSJ7.881e-6659.61Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIP_BETVU1.391e-6260.10Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 P... [more]
CHIT_DIOJA4.048e-6258.33Acidic endochitinase OS=Dioscorea japonica PE=1 SV... [more]
CHI2_BRANA2.231e-4442.92Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AB06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871134 ID=FC871134; Name=FC871134; organism=Citrus sinensis; type=EST; length=749bp
CTTAAGATGATATAAATATAGTACCCATTGCTCTTGAGGGCATTCTTGCC
CTAACTTTTCCCACCAATGTAATGTGTCAAAATGTTGCTAACATTGTGAC
TCCCCAGTTCTTCGACGGCATAAAGAATCAGGCAGCCGCGAGTTGTGCCG
GCAAGAGCTTCTACACGAGAGATGCGTTTCTGAATGCTGCCAAGGCTTAT
CCTCAATTTGGTAGCGGCTCTCCAGAAGTTTCGAAGCGTGAGATTGCTGC
ATTTTTTGCACACGTCACTCATGAAACTGGACATTTCTGCTACATAGAAG
AGATTAACAAGTCCAACAGGTACTGTGATGAACAAAACAAACAGTACCCA
TGTGTTCCCGGAAAGTTCTACTACGGCCGTGGACCGATCCAACTCACCGG
AAATGGCAACTACGGAGCTGCCGGAAAAGCCATCGGGTTTGACGGATTAA
GAGCTCCCGAAACGGTGGCCAAGGACCCCGTTGTGTCATTTAAGACTGCC
GTGTGGTTTTGGATGACCAATGTGCACCCAGTTGTGAACCAAGGTTTTGG
TGCAACAATTCAGAGAATCAATGGTGCCGTTGAATGCGGTGGCAAGCAAC
CTGCTCAGGTTCAAGCTCGCATTGGATATTATAAGGATTATTGCAACAAA
TTTGGTGTTGCTCCTGGCCCAAATCTCTTCTTGTTAAAATGTTTTCGCCG
ATACTTCACTGGTTTGTTGAAATAAGGTGGGGTAATTTTTATAATATAG
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