FC871124

Overview
NameFC871124
Unique NameFC871124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11919 contig Csv1_Contig11919:963..1579. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871124 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45
Identity = 91/115 (79.13%), Postives = 98/115 (85.22%), Query Frame = 3
Query:    3 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKA 347
            PPAIIVEGPQL+KHG +DAI+KVG+ KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+AFGNKISTQ              YS IKA+MEEEKRQMK+
Sbjct:  289 PPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIKAKMEEEKRQMKS 403          
BLAST of FC871124 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44
Identity = 86/116 (74.14%), Postives = 98/116 (84.48%), Query Frame = 3
Query:    3 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 350
            PPA++ EGPQL+KHG +DAI+KVGM+KFISDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKR+MK+A
Sbjct:  292 PPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIKARIEEEKRRMKSA 407          
BLAST of FC871124 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44
Identity = 90/116 (77.59%), Postives = 96/116 (82.76%), Query Frame = 3
Query:    3 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 350
            PPAIIVEGPQL+KHG +DAI+KVGM KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKRQ K A
Sbjct:  292 PPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIKAKIEEEKRQGKTA 407          
BLAST of FC871124 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.693e-44
Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 3
Query:    3 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 350
            PPAI +EGPQL++HG +DAI+KVG+ KF++DLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS+IKA+MEEEKRQ KAA
Sbjct:  299 PPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIKAKMEEEKRQKKAA 414          
BLAST of FC871124 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.693e-44
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 3
Query:    3 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 350
            PPAII+EGPQL+KHG SDAI+KVGM KFISDLFWVGMFYHLYNQLA NTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKR +K+A
Sbjct:  293 PPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIKAKIEEEKRGLKSA 408          
BLAST of FC871124 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43
Identity = 86/116 (74.14%), Postives = 97/116 (83.62%), Query Frame = 3
Query:    3 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 350
            PPA+I+EGP L+K G +DAI+KVG+VKF+SDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS+IKAQ+EEEKRQ KAA
Sbjct:  287 PPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAQIEEEKRQAKAA 402          
BLAST of FC871124 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.040e-40
Identity = 81/115 (70.43%), Postives = 94/115 (81.74%), Query Frame = 3
Query:    3 PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKA 347
            PPA+I EGP+L++HG SDAI+KVG+ KF+SDLF VG+FYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YSYIKA++EEEKR+  A
Sbjct:  295 PPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIKAKIEEEKRKKSA 409          
The following BLAST results are available for this feature:
BLAST of FC871124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TPT_SPIOL1.073e-4579.13Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR2.025e-4474.14Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB2.025e-4477.59Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU7.693e-4473.28Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR7.693e-4475.86Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA1.312e-4374.14Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE1.040e-4070.43Triose phosphate/phosphate translocator, chloropla... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2AA05FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871124 ID=FC871124; Name=FC871124; organism=Citrus sinensis; type=EST; length=617bp
TTCCACCAGCCATCATTGTTGAGGGACCTCAACTGATTAAGCATGGCTTA
AGTGATGCAATTTCCAAAGTGGGCATGGTCAAGTTCATTTCAGATCTTTT
TTGGGTGGGGATGTTTTACCACCTCTACAATCAGTTGGCTACCAACACCT
TGGAGAGGGTTGCACCTCTTACTCATGCAGTTGGCAATGTACTGAAACGT
GTGTTTGTGATTGGGTTCTCAATCCTGGCCTTTGGCAACAAGATCTCAAC
CCAAACTGGTATTGGAACAGTCATTGCAATTGCTGGAGTGGCAGCCTACT
CTTACATCAAGGCCCAAATGGAAGAAGAGAAACGACAAATGAAAGCAGCA
TGAGAAGAAAAGAAGCATGTGAATGAGGAAAGGTCCCGATGTAAAGTCGT
GCTACTTTTTCCCCCAAAGATCAAAATGACAAATTGAGTGTATTTCTTTG
GCTGTGAGGTTATTTTTTGACAATAAATTTTCTTTAATTCAGAGTACAAA
CAATTTGCTAATTTGCAATCAGCTCATGTTGACTGATAATAATGTATCGC
TTGCTTCCGTCTCTCAAAACAAGCTTATATATAATTCAATTAGCAGCTCA
AAAAAAAAAAAAAAAAA
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