FC871123

Overview
NameFC871123
Unique NameFC871123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12709 contig Csv1_Contig12709:705..1481. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.137e-77
Identity = 142/248 (57.26%), Postives = 186/248 (75.00%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEE 730
            GL+ YR E+L   RGNG G+R+  DR+YDYDVYNDLG+PD   +LARPVLGG KQ PYPRRCRTGRP    D  SE R+GN YVPRDE FSEVK   F  KT+ SVLHA VP+ ++A +D    +L FP F  ID LF +GV LP +++ GF ++++PRL++ + D+ GD ILLF+TP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+E+++  +++VEE
Sbjct:  251 GLRSYREEDLKQKRGNGAGQREADDRVYDYDVYNDLGNPDSNGDLARPVLGGSKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSEVKNAQFLLKTLQSVLHAAVPAAQSALIDNLSLNLPFPSFFVIDKLFEDGVELPGVEKLGFLHSIVPRLLELLRDSPGDKILLFDTPANVQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEE 498          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.032e-71
Identity = 132/246 (53.66%), Postives = 174/246 (70.73%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQ---GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN-FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEE 730
            LK+YR EEL  L+G  +   GE   ++RIYDYDVYND+GDPD  PELARPV+GG  +PYPRRC+TGR  C+TD  SE+R G  FYVPRDE FS  K  +F+ K V + L ++ P +E+  + P   FP+F AI  LF EG+ LP  K  G    LLPR++KA+ +  D+IL F+ P  ++RD+F W RD+EF+RQTLAGLNPYSI+L+ EWPL S LDP +YG P S IT E++E+E+ G ++V+E
Sbjct:  212 LKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDNDPELARPVIGGLTHPYPRRCKTGRKPCETDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHFKAIQNLFEEGIQLP--KDAGLL-PLLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVEREVKGNMTVDE 454          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.121e-70
Identity = 136/248 (54.84%), Postives = 177/248 (71.37%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEE 730
            GL+ YR  +L   RG+G GER+  DR+YDYDVYNDLG+PD   +LARPVLGG KQ PYPRRCRTGRP    D  SE R+GN YVPRDE FS  K+  F  KTV SVL A VP+ ++  +D    +L FP F  ID LF +GV LP + +  F  +++PRL++ + DT  + IL FETP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+E+++  +++VEE
Sbjct:  234 GLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNGDLARPVLGGNKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLPFPSFFVIDKLFEDGVELPGVDKLNFLESVVPRLLEHLRDTPAEKILRFETPANIQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEE 481          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.912e-70
Identity = 132/250 (52.80%), Postives = 179/250 (71.60%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG----FWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEEVYE 739
            G++  R +EL  LRG+G  ERK ++R+YDYD YNDLGDPDK  +  RPVLG K++PYPRRCRTGRP+   D  +E R    YVPRDE FS+VK  TFSA T+ S LHA++P++    ++   GF +F AIDAL+++G+ LP     G      N ++PR+V+ IEDT +++L FE PE ++RD+F WFRDEEF+RQTLAGLNP  IR +TE+P+ S LDP +YGP ESA++ E++EK + G ++VEE  E
Sbjct:  211 GIEALRKKELETLRGDGHSERKFHERVYDYDTYNDLGDPDKNIDHKRPVLGTKEHPYPRRCRTGRPKTLYDPETETRSSPVYVPRDEQFSDVKGRTFSATTLRSGLHAILPAV-APLLNNSHGFSHFPAIDALYSDGIPLPVDGHGGNSFNVINDVIPRVVQMIEDTTEHVLRFEVPEMLERDRFSWFRDEEFARQTLAGLNPICIRRLTEFPIVSKLDPAVYGPAESALSKEILEKMMNGRMTVEEAME 459          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.767e-61
Identity = 131/261 (50.19%), Postives = 166/261 (63.60%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPE-LARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR--EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG--------FWNTLLPRLVK----AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEEVYE 739
            G++  R  EL ILRG G GERK +DRIYDYDVYNDLG+PD       RPVLGGK++PYPRRCRTGRPR   D FSE+R  + + YVPRDEAF+E K   F  K   S LHAL   L+TA       FP  SAID L+++     P++ EG           T L  L K    A  +    +  FETPE  DRDKF WFRDEEF+RQT+AG+NP SI+L+TE+P+KS LD   YGP +S IT E++E++I  +++ +E  +
Sbjct:  229 GVEGLRKRELEILRGTGCGERKEHDRIYDYDVYNDLGNPDDDNNPTTRPVLGGKEHPYPRRCRTGRPRSKKDPFSEERSHKEHIYVPRDEAFTERKMGAFDTKKFMSQLHALTTGLKTA-KHKSQSFPSLSAIDQLYDDNFRNQPVQPEGGKLRFVIDLLETELLHLFKLEGAAFLEGIRRVFKFETPEIHDRDKFAWFRDEEFARQTIAGMNPMSIQLVTEFPIKSNLDEATYGPADSLITKEVVEEQIRRVMTADEAVQ 488          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.903e-60
Identity = 130/260 (50.00%), Postives = 166/260 (63.85%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEK---REGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL--GFPYFSAIDALFNEGVNLPPLKQEG-----FWNTLLPRLVKAIEDTGDN-------ILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEE 730
            G+++ R  EL  LRGNG GERK +DRIYDYDVYNDLG    KPE  RPVLGGK++PYPRRCRTGRPR  TD  SE+   ++G  YVPRDE F+E K+  F  K + S LH L   L+   V+ D+   FP  ++IDAL+++     P++ EG       + L   LV  ++  G         +  FETPE  D DK  WFRDEEF+RQTLAG+NP SI+L+TE P+ S LD   YGP +S IT ELIEK+I  +++ EE
Sbjct:  232 GVEKLRKSELEALRGNGCGERKKHDRIYDYDVYNDLG----KPESKRPVLGGKEHPYPRRCRTGRPRSKTDPSSEEESHKKGEMYVPRDETFTERKEQAFLTKQLLSQLHGLCTGLK---VNKDILPSFPTLASIDALYDDDFRNQPVQPEGGKVRLILDLLAKELVHLVKLEGAEFVEGIRRVFKFETPEIHDMDKLAWFRDEEFARQTLAGMNPLSIQLVTELPIVSKLDELKYGPADSLITKELIEKQINRIMTAEE 484          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.537e-59
Identity = 119/251 (47.41%), Postives = 168/251 (66.93%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP-PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPP-ESAITTELIEKEIGGMISVEEVYE 739
            GL+  R +EL  LRGNG+GERK  DRIYDYDVYND+G+PD   ELARP LGG++ PYPRRCRTGR   DTD  SE+R       YVPRDE F E KQ TF+A  + +VLH L+PSL+ + +  D  F  F  ID+L+ EG+ L    + + F    LP++V  ++ + + +L ++TP+ + +DK+ W RD+EF+RQ +AG+NP +I  +T +P  S LDP+IYGP   SA+T + I  ++ G ++V++  E
Sbjct:  240 GLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELARPTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKAVLHNLIPSLKASILAED--FANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKSSEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYGPGLHSALTEDHIIGQLDG-LTVQQALE 487          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 4.572e-56
Identity = 114/241 (47.30%), Postives = 153/241 (63.49%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGM 715
            GL+  R +EL  LRG+G G RK  DRIYDY  YNDLG+PDK  E  RP+LGG++ PYPRRCRTGRP  DT+  +E R       YVPRDEAF E+KQ  FS+  + +VLH L+PSL  +       F  F  ID L+ EG+ L    QE  +  +   LV+ I+++ + +L ++TP  + +DKF W RD+EF+RQ +AG+NP +I  +  +P  S LDP IYGPPES+IT   I   + G+
Sbjct:  230 GLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGGEKIPYPRRCRTGRPPTDTNMLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRLRAVLHTLIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKI--PLVQKIQESSEGMLRYDTPSILSKDKFAWLRDDEFARQAVAGINPVNIERLQVFPPVSKLDPAIYGPPESSITETHIAGHLNGL 468          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.124e-53
Identity = 111/247 (44.94%), Postives = 151/247 (61.13%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR---EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQE---------GFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEI 706
            G+K  R ++L  +RG+G+GERK ++RIYDYDVYNDLGDP +K E  RPVLG  + PYPRRCRTGRP    D   E R   +  FYVPRDE F E+K+ TF A    ++ H LVPS+  A  + D+ F  FS ID L+   + L   + +         GF N +L        +  + +L ++TP  +  D+F W RD EF RQ LAG+NP +I L+ E P++S LDP +YGP ES +T E+I +E+
Sbjct:  228 GIKELREKDLVSVRGDGKGERKPHERIYDYDVYNDLGDP-RKTERVRPVLGVPETPYPRRCRTGRPLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDIPFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGIL--------NVTETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREV 465          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.124e-53
Identity = 116/250 (46.40%), Postives = 154/250 (61.60%), Query Frame = 2
Query:    2 GLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR---EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL-GFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEEVYE 739
            GL+  R  EL  LRG+G GER+  DR+YDYDVYNDLG+PDK    ARPVLGG+Q PYPRR RTGRP   TD  +E R       YV RDE F E K    S   + ++LH  +P L ++ V PD+  F  F  +D LF EG+ L     +  +  +    V+ I++  + +L ++TP+ + +DKF W RD+EF+RQ LAG+NP +I  +  +P  S LDP +YGPPESAIT E I   + GM SV+E  E
Sbjct:  216 GLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGGEQMPYPRRMRTGRPSTATDASAESRVEYPEPIYVSRDEEFEEGKNEMLSEGAIKALLHNFMPLLVSS-VSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKI--PFVRKIQENSEGLLRYDTPDIIKKDKFAWLRDDEFARQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGHLDGM-SVQEAVE 461          
The following BLAST results are available for this feature:
BLAST of FC871123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXC2_ORYSJ6.137e-7757.26Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX2_ARATH5.032e-7153.66Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOXC1_ORYSJ1.121e-7054.84Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX23_HORVU1.912e-7052.80Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOX21_HORVU2.767e-6150.19Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX22_HORVU8.903e-6050.00Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX4_ARATH7.537e-5947.41Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX6_ORYSJ4.572e-5647.30Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX6_ARATH2.124e-5344.94Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
LOX5_ORYSJ2.124e-5346.40Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AA03FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871123 ID=FC871123; Name=FC871123; organism=Citrus sinensis; type=EST; length=777bp
CGGATTGAAGAGATATAGAGCTGAGGAGCTTACCATTTTGCGAGGTAATG
GACAAGGAGAGCGCAAAACCTATGATAGAATCTATGATTATGATGTCTAC
AATGATCTTGGAGATCCAGACAAGAAACCTGAATTAGCAAGGCCTGTGCT
TGGAGGCAAACAAAACCCTTATCCTAGACGTTGCAGAACTGGACGCCCAC
GGTGTGACACAGATCAATTTTCGGAGAAAAGAGAGGGAAACTTTTATGTT
CCAAGGGATGAAGCATTCTCGGAGGTAAAGCAGCTAACATTTTCAGCAAA
GACGGTGTACTCAGTGTTGCATGCGTTGGTACCATCCTTAGAAACCGCCT
TTGTCGATCCTGATCTGGGGTTTCCATACTTCTCTGCTATTGACGCACTC
TTCAATGAAGGAGTCAACTTGCCTCCACTCAAACAGGAAGGTTTTTGGAA
CACACTGCTTCCCAGATTGGTTAAGGCAATTGAGGATACAGGAGATAATA
TTTTGCTGTTTGAGACGCCAGAAACAATGGACAGAGACAAATTCTTTTGG
TTTAGGGATGAGGAATTTTCTAGGCAAACTCTCGCTGGTCTCAACCCGTA
TAGCATAAGGTTGATCACGGAATGGCCGTTGAAAAGCACACTCGATCCTG
ATATTTACGGACCACCAGAATCAGCAATTACCACAGAATTGATTGAAAAA
GAAATTGGAGGAATGATTTCTGTTGAAGAGGTATACGAATGATCATTCTG
AAATATAAATCAACAAGAAAAAGTGAC
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