CX290862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290862 vs. ExPASy Swiss-Prot
Match: Y3725_ARATH (GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana GN=At3g49725 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 4.572e-31 Identity = 82/167 (49.10%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 3 GRLTFGETGEAEVVXXXXXXXXXXXXXXXXX---ETXXXXXXXXXXXXXXXXXXQIEEVXXXXXXXXXXXXXHGGSDGRGLATVAVVGYTNAGKSTLVGALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 494 GR TFG+ GEAEVV ET QI+E G +G T+AVVGYTNAGKSTL+ AL+ + L+ + RLFATLDP LKS LPSG VLLSDTVGFISDLP+QLV AF +TLEEVVEADLL+HV Sbjct: 265 GRHTFGQFGEAEVVSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKRVGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLLSDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHV 431
BLAST of CX290862 vs. ExPASy Swiss-Prot
Match: YNBA_BACSU (Putative GTP-binding protein ynbA OS=Bacillus subtilis GN=ynbA PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.333e-22 Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 231 GLATVAVVGYTNAGKSTLVGALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 494 G+ +A+VGYTNAGKST L+ +D + + LFATLDP + +VLPSG VLLSDTVGFI DLP L+ AF +TLEEV EADL++H+ Sbjct: 199 GVLQIALVGYTNAGKSTWFNRLTSADSYEEDLLFATLDPMTRKMVLPSGYSVLLSDTVGFIQDLPTTLIAAFRSTLEEVKEADLILHL 286
BLAST of CX290862 vs. ExPASy Swiss-Prot
Match: HFLX_ECOLI (GTP-binding protein hflX OS=Escherichia coli (strain K12) GN=hflX PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 3 Query: 240 TVAVVGYTNAGKSTLVGALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 494 TV++VGYTNAGKSTL ++++ +++ +LFATLDP L+ + + + +L+DTVGFI LP LV AF ATL+E +A LL+HV Sbjct: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHV 283
BLAST of CX290862 vs. ExPASy Swiss-Prot
Match: GTPB6_XENLA (Putative GTP-binding protein 6 OS=Xenopus laevis GN=gtpbp6 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.693e-15 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 228 RGLATVAVVGYTNAGKSTLVGALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 494 R ++++GYTN+GK+TL+ AL+ D L +LFATLD + +LP V+ DT+GF+S LP L+++F ATLE+VV +DLL+HV Sbjct: 303 REFPIISILGYTNSGKTTLIKALTGDEGLQPRDQLFATLDVTSHAGLLPCHMPVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHV 392
BLAST of CX290862 vs. ExPASy Swiss-Prot
Match: GTPB6_HUMAN (Putative GTP-binding protein 6 OS=Homo sapiens GN=GTPBP6 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.517e-15 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 228 RGLATVAVVGYTNAGKSTLVGALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 494 R ++VVGYTN GK+TL+ AL+ D+ + +LFATLD + LPS VL DT+GF+S LP L+++F ATLE+V +DL++HV Sbjct: 179 REFPVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHV 268
BLAST of CX290862 vs. ExPASy Swiss-Prot
Match: GTPB6_MOUSE (Putative GTP-binding protein 6 OS=Mus musculus GN=Gtpbp6 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15 Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 228 RGLATVAVVGYTNAGKSTLVGALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 494 R V+VVGYTN GK+TL+ AL+ ++ L + FATLD + + +LPS ++L DT+GF+S LP L+ AF ATLE+V +D+LVHV Sbjct: 282 REFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLDVTVHAGLLPSRLRILYVDTIGFLSQLPHNLIHAFSATLEDVAYSDVLVHV 371
BLAST of CX290862 vs. ExPASy Swiss-Prot
Match: Y1126_METJA (Uncharacterized GTP-binding protein MJ1126 OS=Methanocaldococcus jannaschii GN=MJ1126 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.754e-12 Identity = 36/85 (42.35%), Postives = 60/85 (70.59%), Query Frame = 3 Query: 240 TVAVVGYTNAGKSTLVGALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 494 TV ++GYTNAGK++L+ AL+ + S ++F TL +++ RK+L++DTVGFI DLP +++AF +T+EE ++DL++ V Sbjct: 182 TVGLIGYTNAGKTSLLNALTGENKESKNQVFTTLTTTTRAIK-GIKRKILVTDTVGFIDDLPPFMIEAFLSTIEESADSDLILIV 265 The following BLAST results are available for this feature:
BLAST of CX290862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290862 ID=CX290862; Name=CX290862; organism=Citrus clementina; type=EST; length=494bpback to top |