CX290871

Overview
NameCX290871
Unique NameCX290871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length276
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290871 vs. ExPASy Swiss-Prot
Match: Y5195_ARATH (UPF0717 protein At5g11950 OS=Arabidopsis thaliana GN=At5g11950 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.989e-15
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 1
Query:  121 NNQSKFNRICVFCGSSAGKKSTYKDAAIELGKELVARNIDLVYGGGSVGLMG 276
            N +S+F +ICVFCGS +G +  + DAAIELG ELV R IDLVYGGGSVGLMG
Sbjct:    4 NQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMG 55          
The following BLAST results are available for this feature:
BLAST of CX290871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5195_ARATH4.989e-1569.23UPF0717 protein At5g11950 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionC03001B05Rv OF1 Citrus clementina cDNA clone C03001B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290871 ID=CX290871; Name=CX290871; organism=Citrus clementina; type=EST; length=276bp
TGACTTCAAAAAAAAAAAAGAAGAGAGAAAAAAAACAGTGAGGATATTTG
TTCATAGTTTCTTTGGTTGTGAGAAAAACAAATGGAAATGGAGATGGAGA
TGGAGATGGAGATGGAAATGAATAACCAATCAAAATTCAACAGGATTTGT
GTGTTCTGTGGAAGCAGTGCTGGAAAGAAAAGCACTTACAAAGATGCTGC
CATTGAGCTTGGCAAAGAACTTGTTGCAAGAAATATTGATCTTGTTTATG
GAGGAGGGAGTGTTGGTTTGATGGGT
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