CX290879

Overview
NameCX290879
Unique NameCX290879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7096 contig Ccv1_Contig7096:7..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.378e-34
Identity = 48/95 (50.53%), Postives = 68/95 (71.58%), Query Frame = 1
Query:   73 PLGSTGKSIPLVGFGTV-EYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            P  S  + +P+VG G+  ++   +  KE ++ A+K GYRHFDTAAAY SEQ LGEAL EA+ LGLV S  +LF+TSKLW+T+++   V+P L+K+
Sbjct:   13 PNSSAQQRMPVVGMGSAPDFTCKKDTKEAIIEAVKQGYRHFDTAAAYGSEQALGEALKEAIHLGLV-SRQDLFVTSKLWVTENHPHLVLPALRKS 106          

HSP 2 Score: 70.0922 bits (170), Expect = 6.378e-34
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFDYEGVWEEMEKCQELGPTK 520
            A +K+LKTL LEYLDLYL+H+P+S    + + P++ ED+  FD +GVWE ME+CQ+LG TK
Sbjct:  102 ALRKSLKTLQLEYLDLYLIHWPLSSQPGKFSFPIEVEDLLPFDVKGVWESMEECQKLGLTK 162          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.852e-28
Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 1
Query:   61 IPEEPLGSTGKSIPLVGFGTVEYPL--NEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQK 351
            IPE P     +++P VG GT  +P   +E     +L AI+LGYRHFDTA  Y +E  +GEA+ EA+R GL+ S  ++F+TSK+W +D + GRV+P  ++
Sbjct:    4 IPEVPASELIQTMPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARE 102          

HSP 2 Score: 53.9138 bits (128), Expect = 5.852e-28
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDI--RSFDYEGVWEEMEKCQELG 511
            A ++TL+ LG++Y+DL LVH+PVSL         P+++   SFD EGVW  ME+C  LG
Sbjct:   99 AARETLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLG 157          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.348e-26
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 1
Query:   61 IPEEPLGSTGKSIPLVGFGTVEYPL--NEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQK 351
            IPE P  +   ++P +G GT  +P   +E     +L AI+LGYRHFDTA  Y +E  + EA+ EA+R GLV S  ++F+TSKLW +D + GRV+P  ++
Sbjct:    6 IPEVPASALLPTMPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARE 104          

HSP 2 Score: 50.0618 bits (118), Expect = 2.348e-26
Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLI---LEATCPVKPEDIRSFDYEGVWEEMEKCQELG 511
            A ++TL+ LG++Y+DL LVH+P ++     +   P K E   +FD EGVW  ME+C  LG
Sbjct:  101 AARETLRNLGMDYVDLLLVHWPATVAPGSYDFPFP-KEEMAPAFDMEGVWRGMEECHRLG 159          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.229e-19
Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNS 357
            S+G  +P++G G      +E  KE +L+AIK+GYRHFD AA Y SE  +GEAL EA + GLV+  +ELFIT+K+W +D   G V+    KNS
Sbjct:    7 SSGYEMPVIGLGLWRLEKDE-LKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLVKR-EELFITTKIWNSD--HGHVVEAC-KNS 93          

HSP 2 Score: 36.1946 bits (82), Expect = 8.229e-19
Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSL---ILEATCPVKPED-IRSFD----YEGVWEEMEKCQELG 511
            A K +L+ L ++YLDLYLVH+P+      +  T  +  ED +   D     +  WE MEK   LG
Sbjct:   89 ACKNSLEKLQIDYLDLYLVHYPMPTKHNAIGKTASLLGEDKVLDIDVTISLQQTWEGMEKTVSLG 153          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-18
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            G+ IPL+G GT +    +  KE V +A+ +GYRH D AAAY +E  +G+A  E +    V   ++LF+TSKLW T  +   V P L+K   D
Sbjct:   13 GQKIPLIGLGTWKSEPGQV-KEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLAD 103          

HSP 2 Score: 42.3578 bits (98), Expect = 1.069e-18
Identity = 25/64 (39.06%), Postives = 35/64 (54.69%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSF---DYEGVWEEMEKCQELGPTK 520
            A +KTL  L L+YLDLYL+H+P +    +   P  P+    +   DY+  W+ MEK  E G  K
Sbjct:   96 ALRKTLADLKLDYLDLYLMHWPHAFERGDNLFPKNPDGTMRYDYTDYKDTWKAMEKLVEKGLAK 159          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.056e-18
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 1
Query:   49 MRTAIPEEPLGSTGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            M TA+  E L  TG+ IPL+G GT +    +  K+ V +A+ +GYRH D A  Y +E  +GEA+ E++      S +E+F+TSKLW    +   V   L+K  QD
Sbjct:    1 MATAVEYETL-YTGQKIPLIGLGTWKSAPGQV-KDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQD 103          

HSP 2 Score: 43.8986 bits (102), Expect = 3.056e-18
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSF---DYEGVWEEMEKCQELGPTK 520
            A +KTL+ L L+YLDLYL+H+P +    +   P  P+    +   DY+  W+ MEK  + G TK
Sbjct:   96 ALRKTLQDLQLDYLDLYLMHWPYAFKRGDQIFPQNPDGSVQYDLTDYKDTWKAMEKLVKQGLTK 159          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.721e-18
Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 1
Query:   85 TGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            +G ++P VG GT     + A   R     + GYRH DTAA Y  E+ +G+ L  A+  G+ +   +LF+TSK+W T+    RV P L+   +D
Sbjct:   20 SGHAMPAVGLGTWRAGSDTAHSVRTA-ITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGIDRK--DLFVTSKIWCTNLAPERVRPALENTLKD 109          

HSP 2 Score: 51.6026 bits (122), Expect = 6.721e-18
Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDIRSFDYEGVWEEMEKCQELGPTK 520
            A + TLK L L+Y+DLY +H+P  L   A  P +  ++  FD EGVW+EME   + G  K
Sbjct:  102 ALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.737e-18
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            STG+ +P VG GT +    +  K+ VL A+  GYRH D AAAY +E+ +GEALTE L  G     D++F+TSKLW T  +   V    +++  D
Sbjct:    8 STGQRMPTVGLGTWKSAPGQV-KQAVLAALDCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSD 100          

HSP 2 Score: 38.1206 bits (87), Expect = 8.737e-18
Identity = 22/64 (34.38%), Postives = 33/64 (51.56%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFD---YEGVWEEMEKCQELGPTK 520
            A +++L  L L YLDLYL+H+P++    +   P  P+    +D   Y   W  MEK  + G  K
Sbjct:   93 ACRRSLSDLRLSYLDLYLIHWPMAFGRGDELIPRHPDGTIQYDDTHYRDTWAAMEKLVDQGLAK 156          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.138e-17
Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            S+G  IPLVGFGT +       K  V  A+  GYRH D AA Y +E+ +GEA T+          +++FITSKLW T   +  V P L++   D
Sbjct:    8 SSGHKIPLVGFGTWKAETTLVGKA-VEVALDAGYRHIDCAAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSD 100          

HSP 2 Score: 44.669 bits (104), Expect = 1.138e-17
Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDIRSF-DYEGVWEEMEKCQELGPTK 520
            A ++TL  LGL+YLDLYLVH+PV+    +         + F      WEEMEK  + G  K
Sbjct:   93 ALERTLSDLGLQYLDLYLVHWPVAFEYTSNDIQTSGSTQEFVSIRETWEEMEKLVDAGLVK 153          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 4.219e-17
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1
Query:   88 GKSIPLVGFGTV---EYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G  IP +GFGT    E P +++ +   L A+ +GYRH DTA AY  E+ +G+A+   ++ G+V+  ++LFIT+KLW T      V P L+K+
Sbjct:   13 GHLIPALGFGTYKPKEVPKSKSLEAACL-ALDVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVVKR-EDLFITTKLWCTCFRPELVKPALEKS 102          

HSP 2 Score: 43.5134 bits (101), Expect = 4.219e-17
Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPED---IRSFDYEGVWEEMEKCQELGPTK 520
            A +K+LK L L+Y+DLY++H+PV +   +   PV  +    + + D+   WE +E+C++ G  K
Sbjct:   98 ALEKSLKKLQLDYVDLYIMHYPVPMKSGDNDFPVNEQGKSLLDTVDFCDTWERLEECKDAGLVK 161          
The following BLAST results are available for this feature:
BLAST of CX290879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
6DCS_SOYBN6.378e-3450.53NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
NADO1_ORYSJ5.852e-2844.44Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
NADO2_ORYSJ2.348e-2644.44Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
S6PD_MALDO8.229e-1948.91NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
AK1A1_CHICK1.069e-1841.30Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
AK1A1_XENTR3.056e-1839.05Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
ALDR_HORVU6.721e-1836.56Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
A1A1A_DANRE8.737e-1842.55Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
ALRA_DICDI1.138e-1740.43Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
AK1CD_MOUSE4.219e-1740.22Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03001C03Rv OF1 Citrus clementina cDNA clone C03001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290879 ID=CX290879; Name=CX290879; organism=Citrus clementina; type=EST; length=553bp
TGGAATCATTGTGGTAATTTAGCTAGGCAAATACTGGATAGGAGGAAAAT
GAGGACGGCCATTCCAGAAGAACCCTTGGGCTCAACAGGGAAATCGATTC
CTCTTGTAGGCTTTGGAACCGTTGAATATCCATTGAATGAAGCCTTTAAA
GAACGCGTTCTGCATGCAATTAAGCTGGGGTATAGACACTTTGATACTGC
TGCAGCTTACCCATCCGAGCAACCTCTTGGCGAAGCATTAACTGAAGCTT
TACGTCTTGGCCTCGTTCAATCCGGCGACGAGCTTTTCATCACCTCAAAA
CTCTGGCTCACCGACTCCTATCGCGGCCGTGTCATCCCGGGCCTACAAAA
AAACTCTCAAGACTCTTGGATTGGAGTACCTTGATCTCTATCTAGTTCAT
TTTCCGGTAAGCTTGATTCTAGAGGCGACGTGTCCTGTGAAACCGGAGGA
TATTCGTTCATTTGACTATGAGGGTGTTTGGGAGGAAATGGAGAAATGTC
AAGAGCTAGGTCCTACAAAAAAAAAAAGGAGTAAGTAACTTTACATGCAA
GAA
back to top