CX291025

Overview
NameCX291025
Unique NameCX291025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:313..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 5.492e-74
Identity = 124/180 (68.89%), Postives = 144/180 (80.00%), Query Frame = 3
Query:    6 SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            SP+NITIHWHGIF   ++WADGP+MITQCPI+PG  Y Y+F I  QEGTLWWHAH S LRATV+GA +IRPKSGH YPFPKP KEVPI+ GEWWN D++ +      TGV P  SDA+TINGRPG+LYPCS+++ + L V KGK YLLRIINAA+N QLFFKIANH+ TVVA DA YT P
Sbjct:   74 SPHNITIHWHGIFHKLTVWADGPSMITQCPIQPGQRYAYRFNITGQEGTLWWHAHASFLRATVYGALVIRPKSGHSYPFPKPHKEVPILFGEWWNTDVVALEEAAIATGVPPNNSDAYTINGRPGNLYPCSKDRMFSLNVVKGKRYLLRIINAAMNIQLFFKIANHRLTVVAADAVYTAP 253          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC24_ORYSJ (Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.235e-67
Identity = 114/183 (62.30%), Postives = 142/183 (77.60%), Query Frame = 3
Query:    3 ESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHK-YPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCS-ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            ESPYN+TIHWHGIFQ  + WADGP M+TQCP+RPG +YTY+F +  QEGTLWWH+H S LRATV+GA II+P+ G K YPFP PD+EV ++LGEWW  ++ D+  R  +TG     +DA+TING+PGD Y CS  NQT+K ++++ KTY+LRIINAALN  LFFK+ANH F VVA DA YT P
Sbjct:   74 ESPYNMTIHWHGIFQRGTPWADGPAMVTQCPVRPGGNYTYRFNVTGQEGTLWWHSHFSFLRATVYGALIIKPRGGAKAYPFPVPDEEVVVILGEWWKTNVYDLQQRSLVTGNPAPHADAYTINGKPGDFYNCSAPNQTHKFELKQNKTYMLRIINAALNTPLFFKVANHSFNVVAADACYTKP 256          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 4.979e-67
Identity = 116/180 (64.44%), Postives = 137/180 (76.11%), Query Frame = 3
Query:    6 SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            SPYN++IHWHGI Q+ S WADGP+ ITQCPI+PG SY Y+F I  Q GTLWWHAHIS LRATVHG  +I P +G  YPFP P +EVPI+ GEWWN+D   V ++   TG GP ISDA+T+NG PG LY CS   T+KLKV+ GKTY+LR+INAALN++LFF IANH  TVV VDA Y  P
Sbjct:   78 SPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSYVYRFTITGQRGTLWWHAHISWLRATVHGPMVILPPAGVGYPFPAPHEEVPIMFGEWWNNDTEAVISQALQTGGGPNISDAYTLNGLPGPLYNCSAQDTFKLKVKPGKTYMLRLINAALNDELFFSIANHTLTVVDVDALYVKP 257          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC12_ARATH (Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.449e-66
Identity = 112/178 (62.92%), Postives = 133/178 (74.72%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YNITIHWHG+ QIR+ WADGP  +TQCPIRPG SYTY+F I  QEGTLWWHAH S LRATV+GA II P  G  +PFPKPD++  ++LGEWWN + +DV N+   TG  P ISDA+TING+PGDLY CS  +T  + +  G+T LLR+INAALN  LFF +ANHK TVV  DA Y  P
Sbjct:   77 YNITIHWHGVRQIRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNANPVDVINQATRTGAAPNISDAYTINGQPGDLYNCSTKETVVVPINSGETSLLRVINAALNQPLFFTVANHKLTVVGADASYLKP 254          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 2.471e-66
Identity = 112/178 (62.92%), Postives = 133/178 (74.72%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +NI++HWHG+ Q+R+ WADGP  ITQCPI+ G SY Y F +  Q GTLWWHAHIS LRATV+GA +I PK G  YPFP P KEVP++ GEWWN D  +V N+   TG GP +SDAFTING PG LY CS   T+KLKV+ GKTY+LR+INAALN +LFF +ANH  TVV VDA Y  P
Sbjct:   81 HNISLHWHGVRQVRTGWADGPAYITQCPIQTGQSYVYNFTVAGQRGTLWWHAHISWLRATVYGALVILPKLGVPYPFPAPHKEVPVIFGEWWNADTEEVVNQAVQTGGGPNVSDAFTINGLPGPLYNCSAQDTFKLKVKPGKTYMLRLINAALNEELFFAVANHTLTVVEVDAVYVKP 258          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC8_ORYSJ (Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 3.227e-66
Identity = 111/182 (60.99%), Postives = 144/182 (79.12%), Query Frame = 3
Query:    3 ESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHK-YPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +SPY +++HWHG++Q+RS W DG N ITQCPI+P  ++TY+F I  QEGTLWWHAH S+LRAT++GA II+P++G   YPFP+P +E+PI+LGEWWN ++ DV N G +TG+GP+ISDA TING PGD   C  +  Y+++VE GKT LLRIINAA+N +LFFK+A H FTVVA DA YT P
Sbjct:   71 DSPYPLSLHWHGVYQLRSGWNDGANKITQCPIQPSGNFTYRFNITGQEGTLWWHAHSSLLRATIYGALIIKPRNGPSGYPFPEPYEEIPILLGEWWNRNVDDVENDGYLTGLGPQISDALTINGMPGDQNRCKGSAMYEVEVEYGKTCLLRIINAAVNVELFFKVAGHTFTVVAADASYTKP 252          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.092e-65
Identity = 111/178 (62.36%), Postives = 139/178 (78.09%), Query Frame = 3
Query:    6 SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT 539
            SPYN+TIHWHGI Q+ + WADGP+M+TQCPI+P +SYTY+F +  QEGTLWWHAH S LRATV+GA IIRP++G  YPFP PD+EVPIVLGEWW+ +++D+ +    +G  PR SDAFT+NG  G+LY C+ N T+ + V+   T LLR+INA LN  LFFK+A H FTVVAVDA YT
Sbjct:   79 SPYNLTIHWHGILQLLTPWADGPSMVTQCPIQPNSSYTYRFNVTGQEGTLWWHAHSSFLRATVYGALIIRPRNGSAYPFPAPDQEVPIVLGEWWSRNVVDIESDAVSSGQLPRESDAFTVNGVTGELYQCA-NDTFTVDVQPNTTVLLRVINAGLNTHLFFKVAGHAFTVVAVDACYT 255          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 4.660e-65
Identity = 113/181 (62.43%), Postives = 138/181 (76.24%), Query Frame = 3
Query:    3 ESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +S YN+TIHWHG+FQ++S+W DG NMITQCPI+P N++TY+F I  QEGTL WHAH+  LRAT+HGA IIRP+SG  YPFPKP KEVP++  +WW+ D+  +  R         +SDA+ ING  GD YPCS+N+ + LKV +GKTYLLRIINAALN  LFFKIANH  TVVAVDA YT P
Sbjct:   75 KSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPSNNFTYQFDITGQEGTLLWHAHVVNLRATIHGALIIRPRSGRPYPFPKPYKEVPLIFQQWWDTDVRLLELR------PAPVSDAYLINGLAGDSYPCSKNRMFNLKVVQGKTYLLRIINAALNTHLFFKIANHNVTVVAVDAVYTTP 249          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 6.086e-65
Identity = 111/178 (62.36%), Postives = 132/178 (74.16%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN+TIHWHGI Q R+ WADGP  +TQCPI+PG SY Y+F I  QEGTLWWHAH S LRATV+GA IIRP+    YPF KP +EVP++LGEWW+ D + V    + TG  P ISDA+TING+PGDLY CS+ +T  + V+ G+T LLR INAALN +LF  IA HK TVV VDA YT P
Sbjct:   77 YNVTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGTLWWHAHSSWLRATVYGALIIRPRENKTYPFEKPAREVPLILGEWWDADPIQVIREAQRTGAAPNISDAYTINGQPGDLYNCSKEETTAVPVKPGETALLRFINAALNQELFVSIAQHKMTVVGVDASYTKP 254          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.356e-64
Identity = 113/180 (62.78%), Postives = 137/180 (76.11%), Query Frame = 3
Query:    6 SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            S YN+TIHWHG+FQ++S+W DG NMITQCPI+PG ++TY+F I  QEGTL WHAH+  LRAT+HGA +IRP+SG  YPFPKP KEVPIV  +WW+ D+  +  R         +SDA+ ING  GD YPCSEN+ + LKV +GKTYLLRI+NAALN  LFFKIANH  TVVAVDA Y+ P
Sbjct:   76 STYNVTIHWHGVFQLKSVWMDGANMITQCPIQPGYNFTYQFDITGQEGTLLWHAHVVNLRATLHGALVIRPRSGRPYPFPKPYKEVPIVFQQWWDTDVRLLQLR------PAPVSDAYLINGLAGDSYPCSENRMFNLKVVQGKTYLLRIVNAALNTHLFFKIANHNVTVVAVDAVYSTP 249          
The following BLAST results are available for this feature:
BLAST of CX291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
LAC7_ARATH5.492e-7468.89Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=... [more]
LAC24_ORYSJ2.235e-6762.30Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC12_ORYSJ4.979e-6764.44Laccase-12/13 OS=Oryza sativa subsp. japonica GN=L... [more]
LAC12_ARATH1.449e-6662.92Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 S... [more]
LAC4_ORYSJ2.471e-6662.92Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 ... [more]
LAC8_ORYSJ3.227e-6660.99Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 ... [more]
LAC7_ORYSJ2.092e-6562.36Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC9_ARATH4.660e-6562.43Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=... [more]
LAC3_ORYSJ6.086e-6562.36Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 ... [more]
LAC8_ARATH1.356e-6462.78Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC03003A12SK OF2 Citrus clementina cDNA clone C03003A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291025 ID=CX291025; Name=CX291025; organism=Citrus clementina; type=EST; length=547bp
ACGAGTCGCCTTATAACATCACTATTCACTGGCATGGAATATTTCAGATT
CGAAGCATCTGGGCAGATGGACCAAACATGATAACTCAGTGTCCAATAAG
ACCTGGAAATAGCTACACTTACAAATTTAGAATCATCAATCAAGAAGGAA
CCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCCACCGTCCACGGT
GCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCCATTTCCTAAACC
CGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATCA
TGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTCC
GATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGGA
AAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTAC
GTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAAC
CACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTA
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