CX291028

Overview
NameCX291028
Unique NameCX291028
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length427
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4988 contig Ccv1_Contig4988:139..565. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 8.309e-37
Identity = 73/142 (51.41%), Postives = 104/142 (73.24%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLE 427
            GH+VTAVDL+A+GIN +R++++HTF  YSEPLMEV+AS+P +EKV+L+GHS GG++L LA + +P KISVAVF++A MPD  H  ++  E+Y+EK     D  LD+QFS         +SM+ G +F+ +K++Q C  EDLE
Sbjct:   37 GHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKC--PADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLE 176          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.330e-26
Identity = 61/142 (42.96%), Postives = 87/142 (61.27%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLE 427
            GH+VTA+DLAASG++ ++IE++ +F  YSEPL+  L +LP  EKVILVG S GG+ +A+AADK+  KI+ AVF  + +PDT H PS+V+++  E        W DT +            +  G   L   +Y LC PE+ E
Sbjct:   30 GHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF----PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYE 167          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.003e-23
Identity = 52/141 (36.88%), Postives = 88/141 (62.41%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDL 424
            GHR TA+D+AA+G +  R ++V +   YS PL++ +A+    E+++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL
Sbjct:   32 GHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDL 170          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.003e-23
Identity = 52/141 (36.88%), Postives = 88/141 (62.41%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDL 424
            GHR TA+D+AA+G +  R ++V +   YS PL++ +A+    E+++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL
Sbjct:   32 GHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDL 170          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 8.918e-23
Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQ-FSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLE 427
            GH+VTA+D+AASGI+ ++IE +++F  YSEPL+  L  LP  EKVI+VG S  G+ +A+AAD++  KI+  VF  + +PDT H PS+ +E+  E        W DT+ F+  + +  +  +M  G   L   ++  C   + E
Sbjct:   30 GHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESF----PDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYE 168          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.861e-22
Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDL 424
            GHR TA+D+AASG +  R+++V TF  YS PL++ +A+  A  E+++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL
Sbjct:   35 GHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPE-GLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDL 175          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.861e-22
Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDL 424
            GHR TA+D+AASG +  R+++V TF  YS PL++ +A+  A  E+++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL
Sbjct:   35 GHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPE-GLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDL 175          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.599e-17
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 2
Query:   20 VDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF 325
            VDL   G NM     V T   YS+PL+++L +LP EEKVILVGHS GG +++ A ++FP KIS A+FV A M     RP    + +SE++G  +    ++QF
Sbjct:  128 VDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRP---FDVFSEELGSAERFMKESQF 226          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12
Identity = 45/142 (31.69%), Postives = 71/142 (50.00%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMG-KEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDL 424
            G + T+VDL  +GIN+     V  F  Y+ PL  +L+ LP+  K++LVGHS+GG ++  A  KF  KIS+ V++ A M     +P      +   M   E+D W   ++   + ++     +L   EF     Y   P ED+
Sbjct:   38 GFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEALCKFTDKISMVVYLAADMV----QPGSTSSTHDSIMTVGEEDIW---EYIYGEGADKPPTGVLMKEEFRRHYYYSQSPLEDV 172          
BLAST of CX291028 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 7.083e-12
Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 2
Query:    2 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDL 424
            G + T+VDL  +GI++     V     Y+ PL  +L+ LP   KVILVGHS+GG ++  A  KF  KIS+A+++ A M      PS      S     E+D W   +++  + ++     +L   EF+    Y   P ED+
Sbjct:   37 GFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMVQPGSIPS---PHLSNIHVGEEDIW---EYTYGEGTDKPPTGVLMKPEFIRHYYYSQSPLEDV 171          
The following BLAST results are available for this feature:
BLAST of CX291028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PNAE_RAUSE8.309e-3751.41Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
HNL_HEVBR1.330e-2642.96Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
PIR7A_ORYSJ4.003e-2336.88Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI4.003e-2336.88Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
HNL_MANES8.918e-2338.46Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
PIR7B_ORYSJ9.861e-2239.44Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI9.861e-2239.44Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
Y1399_ARATH5.599e-1744.12Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_RAPSA3.179e-1231.69Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH7.083e-1232.62Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionC03003B03SK OF2 Citrus clementina cDNA clone C03003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291028 ID=CX291028; Name=CX291028; organism=Citrus clementina; type=EST; length=427bp
GGGTCACCGGGTGACGGCTGTGGACCTAGCCGCCTCGGGCATCAACATGA
AGAGAATTGAGGATGTGCACACATTCCATGCATACAGTGAGCCCTTGATG
GAGGTTTTGGCATCACTTCCTGCCGAAGAAAAGGTCATACTTGTCGGACA
CAGTCTTGGGGGCGTCACTTTGGCCCTTGCCGCCGACAAATTCCCACACA
AAATCTCCGTGGCTGTTTTCGTAACTGCATTCATGCCTGACACCACACAC
CGCCCATCTTTTGTTTTGGAGCAGTATTCTGAGAAGATGGGAAAAGAGGA
CGACAGCTGGTTGGACACTCAATTTTCACAATGTGACGCGTCAAATCCAT
CTCACATTTCCATGCTTTTCGGCCGCGAGTTCTTGACTATCAAGATCTAT
CAGCTTTGTCCTCCTGAGGATCTGGAG
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