CX291029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291029 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.778e-12 Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 217 KVRSLAKENSETRVTLAMLGAIPPLAGMLDFQLADSQISSLYALLNLGIGNDLNKAAIVKAGAVHKMLKLIESPVAPNPSVSEAIVANFLGLSALDSNKPIIGSSGAVPFLVKTLKNSDKK 579 ++R LAK N++ RV +A GAIP L G+L + Q S+ ALLNL I + NK AIV AGA+ ++++++ + E A LS +D NK IG+ GA+P LV L ++ Sbjct: 375 EIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICEN-NKGAIVSAGAIPGIVQVLKK---GSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQR 491
BLAST of CX291029 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.778e-12 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 217 KVRSLAKENSETRVTLAMLGAIPPLAGMLDFQLADSQISSLYALLNLGIGNDLNKAAIVKAGAVHKMLKLIESPVAPNPSVSEAIVANFLGLSALDSNKPIIGSSGAVPFLVKTLKNSDKKVSPQAKQD 603 ++RSL+K +++ R+ +A GAIP L +L + +Q +++ +LNL I + NK I+ AGAV +++++ A E A LS D NK IIG SGA+P LV L+N +P+ K+D Sbjct: 354 EIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYEN-NKELIMFAGAVTSIVQVLR---AGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENG----TPRGKKD 474
BLAST of CX291029 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 217 KVRSLAKENSETRVTLAMLGAIPPLAGMLDFQLADSQISSLYALLNLGIGNDLNKAAIVKAGAVHKMLKLIESPVAPNPSVSEAIVANFLGLSALDSNKPIIGSSGAVPFLVKTLKNSDKK 579 ++R LAK N + RV +A GAIP L +L +Q S+ ALLNL I N+ NK AIV AGA+ +++++++ + E A LS +D NK IG++GA+ L+ L+ ++ Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSI-NEGNKGAIVDAGAITDIVEVLKN---GSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRR 484 The following BLAST results are available for this feature:
BLAST of CX291029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291029 ID=CX291029; Name=CX291029; organism=Citrus clementina; type=EST; length=603bpback to top |