CX291038

Overview
NameCX291038
Unique NameCX291038
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12168 contig Ccv1_Contig12168:5..551. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291038 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 4.890e-62
Identity = 114/149 (76.51%), Postives = 124/149 (83.22%), Query Frame = 2
Query:  101 MDSDFGIPRELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTXXXXXXXXXXXXAQKTLEVTKEILSTYKN 547
            MDSDFGIPRELS LQ+LRSLY+PELPPCLQGTTVRVE GD TT    A  H+ISRSFPHTYGQPLAHFLRATAKV DA II+EHPA+RVG+VFCGRQSPGGHNVVWGL++ALK+HNP ST            AQKTLEVT +ILSTYKN
Sbjct:    1 MDSDFGIPRELSDLQKLRSLYKPELPPCLQGTTVRVELGDGTTACSEAGAHTISRSFPHTYGQPLAHFLRATAKVADAHIISEHPAMRVGVVFCGRQSPGGHNVVWGLHNALKIHNPNSTLLGFLGGSEGLFAQKTLEVTDDILSTYKN 149          
BLAST of CX291038 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.089e-61
Identity = 110/149 (73.83%), Postives = 125/149 (83.89%), Query Frame = 2
Query:  101 MDSDFGIPRELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKSTXXXXXXXXXXXXAQKTLEVTKEILSTYKN 547
            MD+D+GIPRELS LQ+LRS Y PELPPCLQGTTVRVE  D+TT ADPA  H+I R FPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVG++FCGRQSPGGHNV+WGL+DALK+HNPK+             AQKTLE+T ++L+TYKN
Sbjct:    1 MDADYGIPRELSDLQKLRSHYHPELPPCLQGTTVRVELRDATTAADPAGEHTIKRFFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGVLFCGRQSPGGHNVIWGLHDALKVHNPKNILLGFLGGSEGLFAQKTLEITDDVLATYKN 149          
The following BLAST results are available for this feature:
BLAST of CX291038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PFPA_RICCO4.890e-6276.51Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_SOLTU1.089e-6173.83Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionC03003C04SK OF2 Citrus clementina cDNA clone C03003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291038 ID=CX291038; Name=CX291038; organism=Citrus clementina; type=EST; length=547bp
AGCCCCAATCAGTATAGTAGTACTGCACACAACACAGTCAATACCAAATA
CCAAAAAAACGCAACAAACAGTAATAACCATCCACTGAAACGAAAACACA
ATGGACTCGGATTTCGGTATTCCGAGAGAACTCTCCGGCCTTCAACAACT
CCGATCTCTTTACCAGCCCGAGCTCCCTCCTTGCCTTCAGGGAACTACTG
TCAGGGTGGAATTTGGTGATTCAACTACAACTGCTGACCCAGCTGATACC
CATTCCATTAGCCGATCCTTTCCTCACACTTACGGTCAGCCTTTGGCTCA
CTTTCTTAGAGCAACTGCCAAAGTACCTGATGCTCAAATTATAACTGAGC
ATCCTGCTATTAGGGTGGGAATTGTCTTCTGTGGAAGACAATCTCCTGGT
GGACACAATGTCGTTTGGGGCCTTTACGATGCGCTCAAGCTACACAACCC
TAAGAGTACTTTGCTTGGATTTTTGGGTGGTTCTGAAGGTTTATTTGCAC
AGAAAACTCTTGAGGTCACAAAAGAAATTCTTTCAACCTACAAAAAT
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