CX291041

Overview
NameCX291041
Unique NameCX291041
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:562..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 4.877e-59
Identity = 118/205 (57.56%), Postives = 138/205 (67.32%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTAN----PIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            KEVPI+ GEWWN D++ +      TGV P  SDA+TINGRPG+LYPCS+++ + L V KGK YLLRIINAA+N QLFFKIANH+ TVVA DA YT PYVTDV+VIAPGQT D LL ADQ V +               V F   TTRG++ Y GAS        +MP LP++ DT TAY FYSN+T L  GP WVP PR VDE M
Sbjct:  157 KEVPILFGEWWNTDVVALEEAAIATGVPPNNSDAYTINGRPGNLYPCSKDRMFSLNVVKGKRYLLRIINAAMNIQLFFKIANHRLTVVAADAVYTAPYVTDVIVIAPGQTIDALLFADQSVDTSYYMAAHPYASAPA-VPFPNTTTRGVIHYGGASKTGRSKPVLMPKLPSFFDTLTAYRFYSNLTALVNGPHWVPVPRYVDEEM 360          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.795e-53
Identity = 104/202 (51.49%), Postives = 134/202 (66.34%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGA-STANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            KEVP++  +WW+ D+  +  R         +SDA+ ING  GD YPCS+N+ + LKV +GKTYLLRIINAALN  LFFKIANH  TVVAVDA YT PY+TDV+++ PGQT D +L ADQP+G+                + +   TRG++VY+GA S+++P  P +P  ND PTA+ F SNIT L GGP W P PR VDE+M
Sbjct:  159 KEVPLIFQQWWDTDVRLLELRPA------PVSDAYLINGLAGDSYPCSKNRMFNLKVVQGKTYLLRIINAALNTHLFFKIANHNVTVVAVDAVYTTPYLTDVMILTPGQTIDAILTADQPIGTYYMAIIPYFSAIGVPASPDTKPTRGLIVYEGATSSSSPTKPWMPPANDIPTAHRFSSNITSLVGGPHWTPVPRHVDEKM 354          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.888e-51
Identity = 104/202 (51.49%), Postives = 131/202 (64.85%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGA-STANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            KEVPIV  +WW+ D+  +  R         +SDA+ ING  GD YPCSEN+ + LKV +GKTYLLRI+NAALN  LFFKIANH  TVVAVDA Y+ PY+TDV+++ PGQT D LL ADQ +G               +   ++  TRG++VY GA S+++P  P +P  ND  TA+ F SNIT L GGP W P PR VDE+M
Sbjct:  159 KEVPIVFQQWWDTDVRLLQLRPA------PVSDAYLINGLAGDSYPCSENRMFNLKVVQGKTYLLRIVNAALNTHLFFKIANHNVTVVAVDAVYSTPYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIG-IPTPDIKPTRGLIVYQGATSSSSPAEPLMPVPNDMSTAHRFTSNITSLVGGPHWTPVPRHVDEKM 353          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC8_ORYSJ (Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 4.735e-46
Identity = 100/202 (49.50%), Postives = 125/202 (61.88%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANP-IMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            +E+PI+LGEWWN ++ DV N G +TG+GP+ISDA TING PGD   C  +  Y+++VE GKT LLRIINAA+N +LFFK+A H FTVVA DA YT PY TDV+VIAPGQT D L+      G                V F+ +T  GIV Y G     P  MP+LP ++D  TA  FY ++TGL+  P     P  VD  M
Sbjct:  156 EEIPILLGEWWNRNVDDVENDGYLTGLGPQISDALTINGMPGDQNRCKGSAMYEVEVEYGKTCLLRIINAAVNVELFFKVAGHTFTVVAADASYTKPYATDVIVIAPGQTVDALMNTTASPG-RYYMAAHVFDSKTVAVPFDQSTATGIVKYKGVPNYAPAAMPSLPPHDDVVTAGRFYWSLTGLA-RPSDPGVPTTVDHNM 355          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC24_ORYSJ (Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.900e-43
Identity = 91/195 (46.67%), Postives = 121/195 (62.05%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE-NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVA--------FNMNTTRGIVVYDGA-STANPIMPALPAYNDTPTAYTFYSNITGL 557
            D+EV ++LGEWW  ++ D+  R  +TG     +DA+TING+PGD Y CS  NQT+K ++++ KTY+LRIINAALN  LFFK+ANH F VVA DA YT PY TDVVVI+PGQT D LL  D  V +                         +++  +  IV Y G  +T+ P++P +P YNDT TA+ F SN+T L
Sbjct:  158 DEEVVVILGEWWKTNVYDLQQRSLVTGNPAPHADAYTINGKPGDFYNCSAPNQTHKFELKQNKTYMLRIINAALNTPLFFKVANHSFNVVAADACYTKPYKTDVVVISPGQTVDALLVPDAGVAAAVGGRYYMAVIPYNSAVNAADPSFLYSLTNSTAIVEYGGGPATSPPMVPDMPEYNDTATAHRFLSNMTAL 352          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC13_ARATH (Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.399e-43
Identity = 95/209 (45.45%), Postives = 120/209 (57.42%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGA--------STANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            +E+ ++LGEWW+ + MDV N  + TG  P ISDAFTING+PGDLY CS  +T +  V  G+  LLR+IN+ALN +LFF +ANHK TVVA DA YT P+ T+V+++ PGQTTDVLL ADQP                   AF+  TT  I+ Y  A        S A  I   LP +NDT TA  F    T     P  V  P  +DE +
Sbjct:  157 REITLLLGEWWDRNPMDVLNLAQFTGAAPNISDAFTINGQPGDLYRCSSQETLRFLVGSGEIVLLRVINSALNQELFFGVANHKLTVVAADASYTKPFSTNVIMLGPGQTTDVLLTADQPPAHYYMAAHAYNSAN---AAFDNTTTTAILKYKDASCVTLQAKSQARAIPAQLPGFNDTATAAAF----TAQMKSPSKVKVPLEIDENL 358          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC12_ARATH (Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.399e-43
Identity = 91/203 (44.83%), Postives = 120/203 (59.11%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVY-DGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            D++  ++LGEWWN + +DV N+   TG  P ISDA+TING+PGDLY CS  +T  + +  G+T LLR+INAALN  LFF +ANHK TVV  DA Y  P+ T V+++ PGQTTDVLL ADQP                    F+  TT  I+ Y    +T+ PIMP LPA+NDT T  +F      L      V  P+ +D+ +
Sbjct:  157 DRQTALMLGEWWNANPVDVINQATRTGAAPNISDAYTINGQPGDLYNCSTKETVVVPINSGETSLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLLTADQP--PKRYYIAARAYQSAQNAPFDNTTTTAILQYKKTTTTSKPIMPVLPAFNDTNTVTSFSRKFKSLRN----VVVPKTIDDNL 353          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.358e-43
Identity = 97/207 (46.86%), Postives = 122/207 (58.94%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYD-GAST-----ANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            +EVP++LGEWW+ D + V    + TG  P ISDA+TING+PGDLY CS+ +T  + V+ G+T LLR INAALN +LF  IA HK TVV VDA YT P+ T V++IAPGQTTDVL+  DQ                   VAF+  TT  ++ YD G +T       P  P LPA+NDT TA  F + I      P  V  P  VDE +
Sbjct:  158 REVPLILGEWWDADPIQVIREAQRTGAAPNISDAYTINGQPGDLYNCSKEETTAVPVKPGETALLRFINAALNQELFVSIAQHKMTVVGVDASYTKPFTTSVLMIAPGQTTDVLVTMDQ--APTRYYLAARAYDSAQGVAFDNTTTTAVIEYDCGCATDFGPSIPPAFPVLPAFNDTNTATAFAAGIR----SPHEVKIPGPVDENL 358          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC9_ORYSJ (Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.092e-42
Identity = 91/210 (43.33%), Postives = 121/210 (57.62%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGS---XXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANPIMP-----ALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            DKE+P++LGEWWNDDI  V ++ ++ G     S+A TIN +PGD++PCS + T+K+ V++G TYLLRIINA L N +FF IA H+ TVV +DA YT P   D ++IAPGQT DVLL+A + +GS                  + FN +T   IV Y  + TA P+ P      LPA  D   A  F + +  L      V  P  VDE M
Sbjct:  161 DKEIPVILGEWWNDDIEHVLDKAQLLGGDVDPSNANTINAQPGDMFPCSRDDTFKVAVQQGNTYLLRIINAGLTNDMFFAIAGHRLTVVGIDARYTKPLTVDYIMIAPGQTMDVLLEAKRTLGSNSRYYMAARTFITLPLDTIPFNNSTATAIVEYTDSVTARPVGPPEFPVQLPAIKDENAAMAFVTQLRSLGNQEHPVHVPTHVDEHM 370          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.689e-41
Identity = 94/201 (46.77%), Postives = 116/201 (57.71%), Query Frame = 3
Query:   15 PIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVY---DGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            PI+LGEWW+ + +DV      TG  P ISDA T+N +PGDLY CS + T    V  G+T LLR INAALN +LF  +A H  TVVA DA YT PY T ++++APGQTTDVL+  DQP G                V F+  TT  I  Y   + AS+A   MP LPAYNDT  A  F +N+ GL    +    P RVDE +
Sbjct:  161 PILLGEWWDMNPVDVVRAATRTGAAPNISDALTVNAQPGDLYSCSSHDTAVFPVTSGETNLLRFINAALNTELFVSLAGHNMTVVAADASYTKPYTTSLLLLAPGQTTDVLVTFDQPPGRYYLAARAYASAQG--VPFDNTTTTAIFDYGAANNASSAAIAMPTLPAYNDTTAATAFTTNLRGL----RKAELPSRVDESL 355          
The following BLAST results are available for this feature:
BLAST of CX291041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
LAC7_ARATH4.877e-5957.56Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=... [more]
LAC9_ARATH1.795e-5351.49Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=... [more]
LAC8_ARATH4.888e-5151.49Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]
LAC8_ORYSJ4.735e-4649.50Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 ... [more]
LAC24_ORYSJ4.900e-4346.67Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC13_ARATH6.399e-4345.45Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 S... [more]
LAC12_ARATH6.399e-4344.83Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 S... [more]
LAC3_ORYSJ8.358e-4346.86Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 ... [more]
LAC9_ORYSJ1.092e-4243.33Putative laccase-9 OS=Oryza sativa subsp. japonica... [more]
LAC17_ORYSJ2.689e-4146.77Putative laccase-17 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionC03003C08SK OF2 Citrus clementina cDNA clone C03003C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291041 ID=CX291041; Name=CX291041; organism=Citrus clementina; type=EST; length=609bp
CCGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATC
ATGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTC
CGATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGG
AAAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTA
CGTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAA
TCACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTACG
TCACCGATGTGGTGGTGATAGCTCCCGGCCAAACCACTGACGTTCTGCTA
AAAGCCGACCAGCCAGTGGGTTCTTATTACATGGCTGCAAGAGCATACGC
TGCCCCGCCGCCGACGCTAGTAGCGTTCAATATGAACACCACGAGAGGCA
TCGTTGTCTACGATGGTGCCAGCACGGCCAATCCTATAATGCCAGCCTTA
CCAGCTTACAATGATACGCCTACAGCCTACACATTTTACAGTAATATAAC
TGGATTAAGTGGTGGACCTCAATGGGTCCCATGCCCACGTCGAGTGGATG
AACGTATGT
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