CX293820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 5.213e-57 Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGEL SWSFYRAGIAEFVATFL LYITVLTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FY+IMQCL AI Sbjct: 36 DYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAI 150
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 6.809e-57 Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGEL SWSFYRAGIAEFVATFL LYIT+LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FY++MQCL AI Sbjct: 33 DYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAI 147
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.517e-56 Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGEL SWSFYRAGIAEFVATFL LYIT+LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FY+IMQCL A+ Sbjct: 33 DYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAV 147
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 215.312 bits (547), Expect = 7.528e-56 Identity = 103/115 (89.57%), Postives = 109/115 (94.78%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGEL SWSFYRAGIAEF+ATFL LYITVLTVMGV+ S SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM+MQCL AI Sbjct: 32 DYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAI 146
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.284e-55 Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGELSSWSFYRAGIAEF+ATFL LYIT+LTVMG+ +S S CS+VGIQG+AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYM+MQCL AI Sbjct: 31 DYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAI 145
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.284e-55 Identity = 103/115 (89.57%), Postives = 109/115 (94.78%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGELSSWSFYRAGIAEF+ATFL LYITVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCL AI Sbjct: 31 DYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAI 145
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 6.373e-55 Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFE EL+SWSFYRAGIAEFVATFL LYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM+MQCL AI Sbjct: 32 DYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAI 146
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.420e-54 Identity = 100/115 (86.96%), Postives = 108/115 (93.91%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAP FEPGELSSWSFYRAGIAEF+ATFL LYITVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFY++MQCL AI Sbjct: 30 DYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAI 144
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 2.422e-54 Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEP EL+SWSFYRAGIAEF+ATFL LYITVLTVMGV + SKC TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM+MQ L AI Sbjct: 33 DYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAI 147
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 4.131e-54 Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGEL+SWSF+RAGIAEF+ATFL LYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAV+Y++MQCL AI Sbjct: 30 DYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAI 144 The following BLAST results are available for this feature:
BLAST of CX293820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293820 ID=CX293820; Name=CX293820; organism=Citrus clementina; type=EST; length=346bpback to top |