CX294099
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294099 vs. ExPASy Swiss-Prot
Match: RB3GP_HUMAN (Rab3 GTPase-activating protein catalytic subunit OS=Homo sapiens GN=RAB3GAP1 PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 8.214e-18 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 216 YQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGC--------SQLLSDMQAFKAANPGCSLEDFVRWHSPPDWTETD 464 YQ L +L GEP+Y P++QE +TEDL++E E++ + G+ G + LLSDM++FKAANPGCSLEDFVRW+SP D+ E + Sbjct: 621 YQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEE 711
BLAST of CX294099 vs. ExPASy Swiss-Prot
Match: RB3GP_XENLA (Rab3 GTPase-activating protein catalytic subunit OS=Xenopus laevis GN=rab3gap1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.186e-16 Identity = 40/91 (43.96%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 216 YQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGC--------SQLLSDMQAFKAANPGCSLEDFVRWHSPPDWTETD 464 +Q +L++L +GEP+Y P++Q+ +T+DL++E E++ + G+ G + LLSDM++FKAANPGC LEDFVRW+SP D+ E + Sbjct: 620 HQSGNLMLLNSGEPLYIPVTQDPAPMTDDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRDYIEEE 710
BLAST of CX294099 vs. ExPASy Swiss-Prot
Match: RB3GP_RAT (Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus GN=Rab3gap1 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.186e-16 Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 216 YQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGC--------SQLLSDMQAFKAANPGCSLEDFVRWHSPPDWTETD 464 +Q L +L GEP+Y P++QE +TEDL++E E++ + G+ G + LLSDM++FKAANPGC LEDFVRW+SP D+ E + Sbjct: 415 HQHGKLTLLRNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRDYIEEE 505
BLAST of CX294099 vs. ExPASy Swiss-Prot
Match: RB3GP_MOUSE (Rab3 GTPase-activating protein catalytic subunit OS=Mus musculus GN=Rab3gap1 PE=2 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 1.549e-16 Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 216 YQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGC--------SQLLSDMQAFKAANPGCSLEDFVRWHSPPDWTETD 464 +Q L +L GEP+Y P++QE +TEDL++E E++ + G+ G + LLSDM++FKAANPGC LEDFVRW+SP D+ E + Sbjct: 621 HQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRDYIEEE 711
BLAST of CX294099 vs. ExPASy Swiss-Prot
Match: RB3GP_DANRE (Rab3 GTPase-activating protein catalytic subunit OS=Danio rerio GN=rab3gap1 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 3.816e-15 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 3 Query: 237 MLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAGC--------SQLLSDMQAFKAANPGCSLEDFVRWHSPPDWTE 458 +L T EP+Y PI+QE +TEDL++E E++ + G+ G + LLSDM++FKAANPGC+L DFVRW+SP D+ E Sbjct: 616 LLNTQEPLYIPITQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCTLLDFVRWYSPRDYVE 697
BLAST of CX294099 vs. ExPASy Swiss-Prot
Match: RB3GP_DROME (Rab3 GTPase-activating protein catalytic subunit OS=Drosophila melanogaster GN=CG31935 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.571e-13 Identity = 56/167 (33.53%), Postives = 87/167 (52.10%), Query Frame = 3 Query: 15 LIQQLQVINCCLSRK-RRHTIATESLESVMRQCSSNVEDSSP--------CMDTMPETPVLYARVCTGELVIRLGAYQPTDLIMLETGEPVYSPISQEGPLLTEDLIKETEELVLRTGSVGAG------CSQLLSDMQAFKAANPGCSLEDFVRWHSPPDWTE-TDQ 467 L Q+LQ++N C+ R+ +R + E ++ + SS E+ C D V + + RL + ++ E E +Y P +QE TED +++ E++L+ G G+G C+ LLSDM+AFKAANP +EDF+RW+SP DW E TD+ Sbjct: 510 LHQKLQMLNVCVERRVQREANSKRKSEGMVGKASSEEEEDEDDDEGEFFDCDDLTAGAGSPTKAVLSLKPEGRLRRLN-NERLLEEPDEYLYIPDTQEPVPKTEDQLQDDAEVMLKLGP-GSGLTTQMMCTSLLSDMEAFKAANPRGIMEDFIRWYSPKDWEEVTDE 674 The following BLAST results are available for this feature:
BLAST of CX294099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294099 ID=CX294099; Name=CX294099; organism=Citrus clementina; type=EST; length=574bpback to top |