CX294114

Overview
NameCX294114
Unique NameCX294114
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10713 contig Ccv1_Contig10713:649..1138. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 5.654e-42
Identity = 72/135 (53.33%), Postives = 108/135 (80.00%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRDEYITPHGPFKTLEELWD 414
            AVNQVE+NP WQQR LRE C+ + + +  +SPLGA G+ WG+  VM++  L++IA A GKT+AQ+CLRW+ EQG +++ K++N++R+KENLDIF+W LTD + ++I+Q+PQ R +P  E+I+ HGP+K++E+LWD
Sbjct:  184 AVNQVEVNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLQEIAGAKGKTLAQICLRWLYEQGDVLLVKTYNEKRMKENLDIFNWELTDEERERISQLPQLRGLPGLEFISDHGPYKSVEDLWD 318          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 3.430e-39
Identity = 68/135 (50.37%), Postives = 100/135 (74.07%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRDEYITPHGPFKTLEELWD 414
            A NQVEMNP WQQR LRE C+ + + +  +SPLGA G+ WG+  VM++  L  IA   GKT+AQ+CLRW+ EQG +++ K++N+ R+KENLDIFDW LT+ + DKI+++PQ R +   +++  +GP+K +E+LWD
Sbjct:  186 AANQVEMNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLHDIAQTKGKTLAQICLRWMYEQGDVLLVKTYNENRMKENLDIFDWELTEEERDKISKLPQQRGLTGMQFVCDNGPYKCVEDLWD 320          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.342e-37
Identity = 78/136 (57.35%), Postives = 100/136 (73.53%), Query Frame = 1
Query:   13 VNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRDEYITPHGPFK-TLEELWDE 417
            V+QVEMN AWQQ++LREFCK   IIVTAFSPL   G+S G N+VM N+ LK+IA+AHGK++AQV LRW+ EQG   V KS++KER+ +NL IFDWALT+ D+ KI+QI Q R++         GP K  L +LWD+
Sbjct:  187 VDQVEMNLAWQQKKLREFCKENGIIVTAFSPL-RKGASRGPNEVMENDVLKEIAEAHGKSIAQVSLRWLYEQGVTFVPKSYDKERMNQNLHIFDWALTEQDHHKISQISQSRLI--------SGPTKPQLADLWDD 313          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.601e-20
Identity = 48/109 (44.04%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            A+NQVE++P   Q  L+ FC    I++TA+SPLG      G   +++NE LK IAD H KTVA V  +W+ ++G + + KS N  R+ EN +IFD+ L++ D DKIN +
Sbjct:  189 AINQVEVHPYLSQPNLKYFCDRYGIVLTAYSPLGQ-----GKCDLLSNETLKSIADKHNKTVANVIFKWLNQRGIVTIPKSSNPARIIENFNIFDFQLSNEDMDKINSL 292          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-20
Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = 1
Query:   13 VNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRDEYITPH 381
            VNQVE +P   Q++LR++CK + I + A+SPL          Q+++NE L QIA+ H K+VAQV LRW ++ G + + KS  + R+ EN DIFD+ L+  D DKI+       + +DE + P+
Sbjct:  161 VNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQG-------QLLDNEVLTQIAEKHNKSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKID------ALNKDERVGPN 270          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 43/138 (31.16%), Postives = 81/138 (58.70%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRDEYI---TPHGPFKTLEELWD 414
            AV Q+EM+P W+  ++ E CK   I VTA+SPLG++  +     + ++  ++++A+   KT  QV ++W +++G  V+ KS   ER+KEN+ +F W + + D+  +  I   + +   E +     HGP+++  ++WD
Sbjct:  185 AVCQMEMHPGWKNDKIFEACKKHGIHVTAYSPLGSSEKN-----LAHDPVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEELFVNKTHGPYRSAADVWD 317          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18
Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKI 327
            Y  AVNQ+E +P   Q +L ++C SK I+VTA+SPLG+    W   +   ++ +  +K IAD + KT AQV +R+ I++  IV+ KS   ER+ EN  +FD+ L   D + +
Sbjct:  177 YKPAVNQIECHPYLTQEKLIQYCNSKGIVVTAYSPLGSPDRPWAKPEDPSILEDPRIKAIADKYNKTTAQVLIRFPIQRNLIVIPKSVTPERIAENFQVFDFELDKEDMNTL 288          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 44/112 (39.29%), Postives = 70/112 (62.50%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKI 327
            Y  AVNQ+E++P   Q +L E+CKSK I+VTA+SPLG+    W   +   ++ +  +K IA  + KT AQV +R+ +++  IV+ KS   ER+ EN  +FD+ L+  D + +
Sbjct:  178 YKPAVNQIEVHPYLTQEKLIEYCKSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKYNKTTAQVLIRFPMQRNLIVIPKSVTPERIAENFQVFDFELSPEDMNTL 289          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.826e-17
Identity = 46/123 (37.40%), Postives = 73/123 (59.35%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQ-HRMMPRDEYIT 375
            A+NQ+E++P   Q +LRE      I+  A+ PLG         +++++ A+  +A AHGKT AQV LRW I+ G +V+A+S N +R+  NL++FD+ LTD +   +N + +  R  P  E  T
Sbjct:  166 AINQIELHPLLNQAELREVNAGYGIVTEAYGPLGVG-------RLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTRFRPDPETYT 281          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.826e-17
Identity = 46/123 (37.40%), Postives = 73/123 (59.35%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQ-HRMMPRDEYIT 375
            A+NQ+E++P   Q +LRE      I+  A+ PLG         +++++ A+  +A AHGKT AQV LRW I+ G +V+A+S N +R+  NL++FD+ LTD +   +N + +  R  P  E  T
Sbjct:  166 AINQIELHPLLNQAELREVNAGYGIVTEAYGPLGVG-------RLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTRFRPDPETYT 281          
The following BLAST results are available for this feature:
BLAST of CX294114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
NADO1_ORYSJ5.654e-4253.33Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
NADO2_ORYSJ3.430e-3950.37Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
6DCS_SOYBN9.342e-3757.35NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
ALRB_DICDI1.601e-2044.04Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
GR_BACSU7.945e-2040.65Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
ALDR_HORVU1.498e-1831.16Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
ALDR_BOVIN9.712e-1839.29Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]
ALDR_PIG1.268e-1739.29Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
Y1984_MYCSK2.826e-1737.40Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS2.826e-1737.40Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionC05011C04SK AbsAOv1 Citrus clementina cDNA clone C05011C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294114 ID=CX294114; Name=CX294114; organism=Citrus clementina; type=EST; length=490bp
TACGGCCGGGCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAG
ACAGCTCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCT
CTCCCTTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGTTATGAAC
AATGAAGCACTGAAGCAGATTGCTGACGCTCACGGCAAGACTGTTGCTCA
GGTTTGTCTTCGATGGATAATTGAGCAAGGGGCGATTGTTGTTGCTAAGA
GCTTCAACAAGGAGAGACTGAAGGAGAACCTGGATATCTTTGACTGGGCA
CTAACTGATCACGATTATGACAAGATTAATCAAATCCCGCAGCACAGAAT
GATGCCCAGAGATGAGTATATTACCCCTCATGGGCCATTCAAGACACTTG
AAGAGCTGTGGGATGAGTAAATCCCCCTTTTAATATCTAATGTATATTCT
ACTTCTTCTGCAATGGAAATTAGCTTTAAGTAAAAAAAAA
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