CX294794

Overview
NameCX294794
Unique NameCX294794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig577 contig Ccv1_Contig577:1..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_ARATH (Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.527e-36
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 1
Query:    1 GTKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKYPQ 237
            GTKKQKY++ISEKKVST IE LC+ YPSEF SYFHYCRSLRF+DKPDY+YLKR+FRDLFIREGFQFDYVFDWT+LKY Q
Sbjct:  219 GTKKQKYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQ 297          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1_EIMTE (Casein kinase I OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.757e-30
Identity = 55/74 (74.32%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVL 225
            TKK KYDKI EKK+STPIEVLCK +P EF++Y +YCRSLRFED+PDYSYL+RLF+DLF REG+Q+D++FDWT L
Sbjct:  220 TKKDKYDKIMEKKMSTPIEVLCKQFPFEFITYLNYCRSLRFEDRPDYSYLRRLFKDLFFREGYQYDFIFDWTFL 293          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_XENTR (Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_XENLA (Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_RAT (Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_PONAB (Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_MOUSE (Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_HUMAN (Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1D_BOVIN (Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1DB_DANRE (Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
The following BLAST results are available for this feature:
BLAST of CX294794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KC1D_ARATH1.527e-3684.81Casein kinase I isoform delta-like OS=Arabidopsis ... [more]
KC1_EIMTE4.757e-3074.32Casein kinase I OS=Eimeria tenella PE=2 SV=1[more]
KC1D_XENTR6.212e-3072.37Casein kinase I isoform delta OS=Xenopus tropicali... [more]
KC1D_XENLA6.212e-3072.37Casein kinase I isoform delta OS=Xenopus laevis GN... [more]
KC1D_RAT6.212e-3072.37Casein kinase I isoform delta OS=Rattus norvegicus... [more]
KC1D_PONAB6.212e-3072.37Casein kinase I isoform delta OS=Pongo abelii GN=C... [more]
KC1D_MOUSE6.212e-3072.37Casein kinase I isoform delta OS=Mus musculus GN=C... [more]
KC1D_HUMAN6.212e-3072.37Casein kinase I isoform delta OS=Homo sapiens GN=C... [more]
KC1D_BOVIN6.212e-3072.37Casein kinase I isoform delta OS=Bos taurus GN=CSN... [more]
KC1DB_DANRE6.212e-3072.37Casein kinase I isoform delta-B OS=Danio rerio GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05056A06SK PhIFruit1 Citrus clementina cDNA clone C05056A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294794 ID=CX294794; Name=CX294794; organism=Citrus clementina; type=EST; length=606bp
GGCACAAAAAAGCAAAAATATGATAAGATCAGCGAAAAGAAGGTGTCAAC
TCCGATAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCATACT
TTCATTACTGTCGATCGTTGCGGTTTGAGGACAAACCAGATTATTCATAT
TTAAAGAGGCTTTTCCGCGACTTATTTATTCGAGAAGGTTTTCAGTTTGA
CTATGTATTTGATTGGACTGTATTAAAGTACCCTCAGATTGGTTCCAGCT
CTAAAGGAAGGCATTCCAGTGGGAAGGTAGGCTTAACCCCAGGACCATCT
GCTGAAAGACCAGAAAGGGGTTCAGTTGGGAAGGAGATTAGGGACAAATT
GTCTGGTGCAGTTGAAGCATTTTCAAGAAAAAATGCTGCTGGTACTCCTC
ATCGTGATCATCCCAGACACAAGAGTTCAGATGATGGTCCTTCATCTAAG
CATGTGAACCCTGATTCTGAAAAAGGACGAAGCTTTTCCCGGTATGGAAG
CACTTCAAGAAAAGCTGTAATCGCAAGCACTAAACCTGGTTCATCTGGTG
AATTCAGTGAGTGTCGCTCTAGCCGACTAGTCTCAAGCAGTGGCCGCTTG
TCTACC
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