CX294964

Overview
NameCX294964
Unique NameCX294964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig651 contig Ccv1_Contig651:124..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LECS_VATMA (Seed lectin OS=Vatairea macrocarpa PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19
Identity = 75/241 (31.12%), Postives = 114/241 (47.30%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFT 695
            VSFSF+ FNP   +   +I  G A+  S G L LT     +  D      +GR LY+ P+  W       A  +T+F+  +   P+ + +ADG+ F  A  DT P  +                 AVE DT+ N +  DP A H+GI++     N  +S+       ++G+   V+I Y+  TK L   + Y  N    ++   + L   +P  V VGF+A++G   D  E+H VLDW+FT
Sbjct:    4 VSFSFTKFNP---NPKDIILQGDALVTSKGKLQLTKVKDGKPVDH----SLGRALYAAPIHIWDDSTDRVASFATSFSFVVEA-PDESKTADGIAFFLAPPDTQPQKDGGFLGLFNDSNKSIQTVAVEFDTFSNTW--DPSARHIGINV-----NSIESMKYVKWGWENGKVANVYISYEASTKTLTASLTYPSNATSYIVSANVDLKSALPEWVRVGFSATSGLSRDHVETHDVLDWSFT 229          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: PHAE_PHAVU (Erythroagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=DLEC1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 74/240 (30.83%), Postives = 102/240 (42.50%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 692
            SFSF  FN  +     ++   A   S G L LT+      P    L  +GR  YS P+  W       A   T+FT  I   PN +  ADG+ FV     S P +                A    VE DT  N +W DP   H+GID+     N  KS+ ++  D   G   +V I YD  TK+L   + Y       ++   + L   +P  V VGFTA+TG      E++ +L W+F
Sbjct:   26 SFSFQRFNETNL----ILQRDATVSSKGQLRLTNVNDNGEPT---LSSLGRAFYSAPIQIWDNTTGAVAASPTSFTFNID-VPNNSGPADGLAFVLLPVGSQPKDKGGLLGLFNNYKYDSNAHTVAVEFDTLYNVHW-DPKPRHIGIDV-----NSIKSIKTTTWDFVKGENAEVLITYDSSTKLLVASLVYPSLKTSFIVSDTVDLKSVLPEWVIVGFTATTGITKGNVETNDILSWSF 251          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC5_DOLBI (Lectin DB58 OS=Dolichos biflorus PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 71/240 (29.58%), Postives = 106/240 (44.17%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPV------TAWPAMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 692
            SFSF +FN       S I  G  T S   L LT       P    L  +GR  YS P+      T   A  +T+FT  I   PN + SADG+ F      S P                  A    VE DT+ N  W DP + H+GID+     N  KS+ ++   L +G+  ++ I Y+  T +L   + +       ++   + ++  +P  V +GF+A+TG    ++E+H VL W+F
Sbjct:   27 SFSFKNFN-----SSSFILQGDATVSSSKLRLTKVKGNGLPT---LSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFA-PNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDW-DPTSRHIGIDV-----NSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSF 251          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC1_DOLBI (Seed lectin subunit I OS=Dolichos biflorus PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 73/240 (30.42%), Postives = 104/240 (43.33%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPV------TAWPAMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 692
            SFSF +FN  S      I  G  T S G L LT       P    L   GR  YS P+      T   A  +T+FT++IS  P+    ADG+ F      S P                  A    VE DT+ N  W DP   H+GID+     N  KS+ +   DL +G   ++ I Y+  T +L   + +       ++   + ++  +P  V VGF+A+TG    + E+H VL W+F
Sbjct:   27 SFSFKNFNSPS-----FILQGDATVSSGKLQLTKVKENGIPTPSSL---GRAFYSSPIQIYDKSTGAVASWATSFTVKISA-PSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTVAVEFDTFSNSGW-DPSMKHIGIDV-----NSIKSIATVSWDLANGENAEILITYNAATSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSF 251          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_SOYBN (Lectin OS=Glycine max GN=LE1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 74/238 (31.09%), Postives = 111/238 (46.64%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP----AMISTTFTIRISPY-PNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDF-SESHQVLDWTF 692
            VSFS++ F PK     ++I  G A+  S G L L       +P    L   GR LYS P+  W     ++ S   +   + Y P+T   ADG+ F  A  DT P T                  AVE DT++N +  DP   H+GI++     N  +S+ ++  DL + +  +V I YD  T +L   + Y       ++   + L  ++P  V +GF+A+TG D   ESH VL W+F
Sbjct:   36 VSFSWNKFVPKQ---PNMILQGDAIVTSSGKLQLNKVDENGTPKPSSL---GRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSW--DPPNPHIGINV-----NSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSF 260          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LECB_SPAPA (Seed lectin beta chain OS=Spatholobus parviflorus PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 73/241 (30.29%), Postives = 104/241 (43.15%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTF 692
            SF FS F P    + +LI  G A+    G L LT+  S   P+   L   GR  YS P+  W       A  +T+F   I   PN    ADG+ F  A   S P                      AVE DTY+N  ++DP   H+G D+     N   S+ +    L +G   +V I Y+   K+L   + Y  +    ++   + LS  +P  V VGF+A+TG    + E+H V  W+F
Sbjct:    5 SFVFSKFKPL---EPNLILQGDALVTVAGVLQLTNVDSNGVPEPSSL---GRATYSAPINIWDSATGLVASFATSFRFTIYA-PNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVGDTTYQTVAVEFDTYENTVFTDPPYTHIGFDV-----NSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSF 233          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: PHAM_PHAVU (Leucoagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=PDLEC2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 74/238 (31.09%), Postives = 101/238 (42.44%), Query Frame = 3
Query:   12 FSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX--AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 692
            FSF  FN     + +LI  G A   S G L LT+  S   P    +  +GR  YS P+  W       A   T FT  I   PN    ADG+ F      S P +                  AVE DT  N  W DP   H+GID+     N  KS+ ++  D  +G   +VHI Y+  TK+L   + Y        +   + L   +P  V VGF+A+TG      E++ +L W+F
Sbjct:   27 FSFDRFN-----ETNLILQGDASVSSSGQLRLTNVNSNGEPT---VGSLGRAFYSAPIQIWDYTTGNVASFDTNFTFNIL-VPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNKDW-DPRERHIGIDV-----NSIKSIKTTPWDFVNGENAEVHITYESSTKLLVASLVYPSLKTSFTVSDTVDLKSVLPEWVSVGFSATTGITKGNVETNDILSWSF 249          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC1_MEDTR (Lectin 1 OS=Medicago truncatula GN=LEC1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 74/242 (30.58%), Postives = 113/242 (46.69%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX-----AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            SF+ + F   S    +LI  G A+T S G L LT               +GR LYS P+  W       A   T FT  I+  P +++ ADG+ F  A  DT P                        AVE+DT+ N +  DP  N H+GI++     N  KS+ ++   L++GR   V + +D  T +L V ++Y G P   ++   + L + +P  V +GF+A+TG +F+E H +  W+F
Sbjct:   35 SFTITKF---SQDQKNLIFQGNAITTSTGKLQLTKAVK---------NSIGRALYSAPIHIWDSKTGDVANFETLFTFAITA-PYSSNVADGLAFFIAPVDTQPQNIGRAGFLGVFNSETYNKSIQTVAVEIDTFHNTW--DPKINRHIGINV-----NCIKSISTTSWVLENGREANVLVRFDAHTNVLSVVLSYPGLPDSYILSDVVPLKDIVPEWVRIGFSAATGAEFAE-HDIRYWSF 255          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16
Identity = 72/245 (29.39%), Postives = 103/245 (42.04%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWPAMIST--TFTIRIS-----PYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGP--DFSESHQVLDWTFTRS 701
            +SFSFS F P +  D   +   A+    G L LT       P        GR LY++PV  W +   T  +F  R S     PY      ADG+ F      S P +                    AVE DT+ N  W  P   H+GID+     N  +S+ +    L +G+   V I YD  +KIL+V + Y  +     I   + + + +P  V VG + +TG   D +E+H V  W+F  S
Sbjct:    4 ISFSFSEFEPGN--DNLTLQGAALITQSGVLQLTKINQNGMP---AWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLP-ADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQTLAVEFDTFSNP-WDPPQVPHIGIDV-----NSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LECA_SPAPA (Seed lectin alpha chain OS=Spatholobus parviflorus PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16
Identity = 72/241 (29.88%), Postives = 102/241 (42.32%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFS--ESHQVLDWTF 692
            SF FS F P    + +LI  G A+    G L LT+      P+   L   GR  YS P+  W       A  +T+F   I   PN    ADG+ F  A   S P                      AVE DTY+N  ++DP   H+G D+     N   S+ +    L +G   +V I Y+   K+L   + Y  +    ++   + LS  +P  V VGF+A+TG      E+H V  W+F
Sbjct:    5 SFVFSKFKPL---EPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSL---GRATYSAPINIWDSATGLVASFATSFRFTIYA-PNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGSTYQTVAVEFDTYENTVFTDPPYTHIGFDV-----NSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSF 233          
The following BLAST results are available for this feature:
BLAST of CX294964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
LECS_VATMA5.084e-1931.12Seed lectin OS=Vatairea macrocarpa PE=1 SV=1[more]
PHAE_PHAVU9.587e-1830.83Erythroagglutinating phytohemagglutinin OS=Phaseol... [more]
LEC5_DOLBI9.587e-1829.58Lectin DB58 OS=Dolichos biflorus PE=1 SV=2[more]
LEC1_DOLBI9.587e-1830.42Seed lectin subunit I OS=Dolichos biflorus PE=1 SV... [more]
LEC_SOYBN1.252e-1731.09Lectin OS=Glycine max GN=LE1 PE=1 SV=1[more]
LECB_SPAPA6.214e-1730.29Seed lectin beta chain OS=Spatholobus parviflorus ... [more]
PHAM_PHAVU1.060e-1631.09Leucoagglutinating phytohemagglutinin OS=Phaseolus... [more]
LEC1_MEDTR1.808e-1630.58Lectin 1 OS=Medicago truncatula GN=LEC1 PE=3 SV=1[more]
LEC_ERYCG5.261e-1629.39Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
LECA_SPAPA5.261e-1629.88Seed lectin alpha chain OS=Spatholobus parviflorus... [more]

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Properties
Property NameValue
Genbank descriptionC05065B03SK DroRLeaf1 Citrus clementina cDNA clone C05065B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294964 ID=CX294964; Name=CX294964; organism=Citrus clementina; type=EST; length=717bp
GAGGTGTTAGCTTCTCATTTTCCTCATTCAACCCAAAAAGTTGTAGCGAT
GGCAGCCTAATTTGCATGGGCGCAGTGACTCCAAGTTATGGCTACTTGAG
CCTCACATCAGACCCTTCACCAGAATCGCCAGATCAGCTGCCGCTAAAAA
AGGTTGGACGGGTTTTATACAGCCAGCCTGTGACTGCATGGCCAGCTATG
ATTAGTACCACCTTCACCATTAGGATCTCACCCTACCCAAATACAACGGA
TTCTGCAGATGGCATGACGTTTGTTTTTGCAACCGATACCAGCCCTCCAA
CTGAAAACTCCGCCGGCGGAAATCTTGGACTGAGTAACGGTGTTTCGCAA
TTAGCCGTGGAGCTGGACACTTACAAGAACGACTACTGGTCTGATCCAGA
TGCTAACCATATGGGCATTGACATAGCAAACTTAACATCGAATCCAGCCA
AGAGTCTCGACAGCTCTGGTATTGATCTCAAAAGTGGAAGACCGATCCAG
GTTCACATTTATTACGATGGATGGACGAAAATACTCTATGTTTATGTGGC
ATATGCGGGGAACCCACTTCAGAAGCTTATTGAAAGACCTATCCTCTTGT
CAGAAACAATTCCAAGCTCAGTCTATGTTGGCTTCACAGCATCCACAGGG
CCCGACTTTTCAGAAAGCCATCAGGTGCTTGATTGGACCTTCACACGTTC
CCATTGCCTTCTTCTCT
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