CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.469e-63
Identity = 77/108 (71.30%), Postives = 92/108 (85.19%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G   QPL+W +RLK+A+GAA+GLAFLH+S+ +VIYRDFK SNILLD  Y AK+SDFGLAK GP   +SHV+TRVMGT+GYAAPEY+ATGHL  KSDVY FGVVL+E+L
Sbjct:  167 GLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELL 274          

HSP 2 Score: 100.908 bits (250), Expect = 1.469e-63
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 2
Query:   98 GQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKA--PGKSGSGTVIAVKKLNSESLQGFEEWQGVL----LFSHLH 346
            G+IL +PNL+ F+F EL++ATRNF+ D+VLGEGGFG VFKGW+DEK+    + G+G VIAVKKLN +  QG +EW   +     FSH H
Sbjct:   45 GEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRH 133          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 6.092e-46
Identity = 69/105 (65.71%), Postives = 84/105 (80.00%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            + L WN+R+KIA GAA+GL FLH  ++  VIYRDFK+SNILLD  +  K+SDFGLAKLGP+  +SHV+TRVMGTYGY APEY  TG L VKSDVY FGVV +E++
Sbjct:  180 EALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELI 284          

HSP 2 Score: 63.5438 bits (153), Expect = 6.092e-46
Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = 2
Query:  131 FTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEW-QGVLLFSHLH 346
            F F EL AAT NF  DT LGEGGFG+V+KG LD        +G V+AVK+L+   LQG  E+   VL+ S LH
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLD-------STGQVVAVKQLDRNGLQGNREFLVEVLMLSLLH 139          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.993e-41
Identity = 78/103 (75.73%), Postives = 93/103 (90.29%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            P  W++R+KI IGAARGLAFLH+  ++VIYRDFKASNILLD +Y AK+SDFGLAKLGP+  +SHVTTR+MGTYGYAAPEY+ATGHLYVKSDV+ FGVVL+EI+
Sbjct:  187 PFPWDLRIKIVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIM 289          

HSP 2 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 42/82 (51.22%), Postives = 67/82 (81.71%), Query Frame = 2
Query:   95 NGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEK--APGKSGSGTVIAVKKLNSESLQGFEEWQGVLLF 334
            +G++L +PNL+++ F++L+ AT+NFK D++LG+GGFGKV++GW+D    AP + GSG ++A+K+LNSES+QGF EW+  + F
Sbjct:   62 SGKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNF 143          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 75/108 (69.44%), Postives = 92/108 (85.19%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G+  QPL+W +RLK+A+GAA+GLAFLH ++  VIYRDFK SNILLD  Y AK+SDFGLAK GP+  +SHV+TR+MGTYGYAAPEY+ATGHL  KSDVY +GVVL+E+L
Sbjct:  168 GSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVL 275          

HSP 2 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 2
Query:   98 GQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEK--APGKSGSGTVIAVKKLNSESLQGFEEW 316
            G+IL +PNL+ FTF EL+AATRNF+ D+VLGEGGFG VFKGW+DE+     K G+G VIAVKKLN +  QG +EW
Sbjct:   46 GEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEW 120          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G   QPL+WN R+++A+GAARGLAFLH +  QVIYRDFKASNILLD +Y AK+SDFGLA+ GP    SHV+TRVMGT GYAAPEY+ATGHL VKSDVY FGVVL+E+L
Sbjct:  167 GTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELL 274          

HSP 2 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 2
Query:   98 GQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEK--APGKSGSGTVIAVKKLNSESLQGFEEW 316
            G+IL   NL+ F+  EL++ATRNF+ D+V+GEGGFG VFKGW+DE   AP K G+G VIAVK+LN E  QG  EW
Sbjct:   45 GEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREW 119          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37
Identity = 72/104 (69.23%), Postives = 88/104 (84.62%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            QPL W IR+K+AIGAA+GL FLH +  QVIYRDFKA+NILLD  + +K+SDFGLAK GP+  ++HV+T+VMGT+GYAAPEYVATG L  KSDVY FGVVL+E+L
Sbjct:  184 QPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELL 287          

HSP 2 Score: 94.3597 bits (233), Expect = 6.237e-19
Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 2
Query:   74 SGDESYPN----GQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLD--EKAPGKSGSGTVIAVKKLNSESLQGFEEW 316
            S  ES P     G+IL +PNL+ FTF EL+ ATRNF+ D++LGEGGFG VFKGW+D       K GSG V+AVKKL +E  QG +EW
Sbjct:   48 SSVESLPTPRTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEW 134          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.663e-37
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            QPL W IR+K+A+GAA+GL FLH +  QVIYRDFKA+NILLD  + AK+SDFGLAK GP+   +HV+T+V+GT+GYAAPEYVATG L  KSDVY FGVVL+E++
Sbjct:  187 QPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELI 290          

HSP 2 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 2
Query:   98 GQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKA--PGKSGSGTVIAVKKLNSESLQGFEEW 316
            G+IL +PNL+ FTF EL+ AT+NF+ D +LGEGGFG VFKGW+D+ +    + GSG V+AVK+L  E  QG +EW
Sbjct:   63 GEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEW 137          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36
Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 1
Query:  319 GGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G    +PL+W +R+K+A+ AA+GLAFLH+   +VIYRD KASNILLD  + AK+SDFGLA+ GP   QS+V+TRVMGT+GYAAPEYV+TGHL  +SDVY FGVVL+E+L
Sbjct:  160 GNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELL 268          

HSP 2 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 2
Query:   65 SASSGDESYPNGQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEK--APGKSGSGTVIAVKKLNSESLQGFEEW 316
            S+SS       G+IL +  ++ F+F EL+ ATRNF+SD+V+GEGGFG VF+GWLDE    P KS SG VIAVK+LN +  QG  EW
Sbjct:   27 SSSSATAHKTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREW 112          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 7.839e-36
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGP-----SASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            +PL + +RL+IA+G+A+G+ +LHT ++  + +RD KASNILLD  +TAK++DFGL++L P       S  HV+T V GT GY  PEY  T  L  KSDVY  GVVL+E+    +P
Sbjct:  716 EPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQP 830          

HSP 2 Score: 63.5438 bits (153), Expect = 7.839e-36
Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 2
Query:  107 LPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEW-QGVLLFSHLH 346
            L    ++ FT+ EL  AT NF S T +G+GG+GKV+KG L        GSGTV+A+K+    SLQG +E+   + L S LH
Sbjct:  605 LKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTL--------GSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLH 677          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            GA  +PL W +R+ +A+ AA+GLAFLH+   +VIYRD KASNILLD  Y AK+SDFGLA+ GP    S+V+TRVMGTYGYAAPEY+++GHL  +SDVY FGV+L+EIL
Sbjct:  166 GAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEIL 273          

HSP 2 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 46/75 (61.33%), Postives = 55/75 (73.33%), Query Frame = 2
Query:   98 GQILPTPNLRIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEK--APGKSGSGTVIAVKKLNSESLQGFEEW 316
            G+IL +  ++ FTF EL+ ATRNF+ D+V+GEGGFG VFKGWLDE    P K G+G VIAVKKLN E  QG  EW
Sbjct:   44 GEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREW 118          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
APK1A_ARATH1.469e-6371.30Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
PBS1_ARATH6.092e-4665.71Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CX32_ARATH1.993e-4175.73Probable serine/threonine-protein kinase Cx32, chl... [more]
APK1B_ARATH4.908e-4069.44Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH8.371e-4072.22Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2B_ARATH2.977e-3769.23Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH8.663e-3767.31Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y3545_ARATH7.334e-3664.22Probable receptor-like protein kinase At3g55450 OS... [more]
Y1684_ARATH7.839e-3648.70Probable LRR receptor-like serine/threonine-protei... [more]
BIK1_ARATH1.806e-3463.89Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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