CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.128e-70
Identity = 128/177 (72.32%), Postives = 150/177 (84.75%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE------TFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEELI 518
            FEPKISDFGLARLMNPIDTHLSTFVNGEFGD GYVAPEY+RT+VATPKGDVYSFG VLLELVTG++ T+V K  E       FKGNLVEWI +LSS  +LQ+AID+ L+  GVD+E+F+ LKVACNCVLP I K+RPTMFEVYQ LRAIGE Y+FT +D+I++PS+SG+ D +EELI
Sbjct:  441 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLLGNGVDDEIFKVLKVACNCVLPEIAKQRPTMFEVYQLLRAIGESYNFTADDDILIPSESGEGDFIEELI 617          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.216e-40
Identity = 77/147 (52.38%), Postives = 114/147 (77.55%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 446
            F+ +I+D+GLA+L+   D++ S+F NG+ G+LGYVAPEY+ T+VA+ KGDVY FG VLLELVTG++P +V    E FKG+LV+W++Q   TG+ +DAID+ +  KG D E+ QFLK+AC+CV+ + PKERPTM +VY+ L+ + +++
Sbjct:  438 FDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSICDKGHDEEILQFLKIACSCVV-SRPKERPTMIQVYESLKNMADKH 583          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 9.974e-35
Identity = 70/152 (46.05%), Postives = 110/152 (72.37%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTE 461
            F+ ++ D+GL +L++  D+  S+F NG+FG   YVAPEY+ T+VA+  GDVY FG VLLE+VTG++P  +    E FK +LVEW+++  S G+ +DAID+ +  KG D+E+ Q L++AC+CV+ + PKERP M +VY+ L+ +G+++ F +E
Sbjct:  428 FDARVIDYGLGKLVSSQDSKDSSFSNGKFG---YVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAIDRRIFGKGYDDEIMQVLRIACSCVV-SRPKERPLMIQVYESLKNLGDQHGFFSE 575          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.861e-27
Identity = 65/143 (45.45%), Postives = 91/143 (63.64%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            FEPK++DFGLARL++  ++H+ST + G FG   Y+ PEY ++  AT KGDVYSFG +LLELVTG+ PT      E+  GNLV W  Q  + G+  D ID  LV+  + N   + L++A  C+  T P +RP M +V + L+ I
Sbjct: 1055 FEPKVADFGLARLISACESHVSTVIAGTFG---YIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG-PDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAET-PAKRPNMLDVLKALKEI 1192          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 4.200e-25
Identity = 60/140 (42.86%), Postives = 91/140 (65.00%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            F   ++DFGLARLM+P +TH+ST +    G LGY+ PEY +  VAT KGDVYSFG VLLEL+T +RP ++ K P+  + +L+ W+ ++    +  +  D  + +K  D E+F+ L++AC C L   PK+RPT  ++  +L
Sbjct:  872 FNSHLADFGLARLMSPYETHVSTDL---VGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCK-PKGCR-DLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLC-LSENPKQRPTTQQLVSWL 1005          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.144e-22
Identity = 58/140 (41.43%), Postives = 86/140 (61.43%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            FE  ++DFGLARL+ P DTH++T +    G LGY+ PEY+++L+AT +GDVYSFG VLLELVTG RP  V K       +LV  + Q+ +  +  + ID  +     +  + + L++AC C+    P+ RP + EV  +L
Sbjct:  892 FEAHLADFGLARLLRPYDTHVTTDL---VGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSC--RDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCI-DHEPRRRPLIEEVVTWL 1025          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.144e-22
Identity = 60/143 (41.96%), Postives = 85/143 (59.44%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            F   ++DFGLARL+ P DTH++T +    G LGY+ PEY +  VAT KGDVYSFG VLLEL+TG RP +V K   +   +L+ W+ Q+ +  +  +  D  +  K    E+   L++AC C L   PK RPT  ++  +L  I
Sbjct:  881 FVAHLADFGLARLILPYDTHVTTDL---VGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGS--RDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRC-LGENPKTRPTTQQLVSWLENI 1017          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.494e-22
Identity = 64/144 (44.44%), Postives = 92/144 (63.89%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK--GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            E ++SDFG+ARLM+ +DTHLS  V+   G  GYV PEY ++   + KGDVYS+G VLLEL+TG++PT+ A   +    NLV W+ +L + G++ D  D+ L+ +   ++ EL Q LKVAC C L     +RPTM +V    + I
Sbjct: 1027 EARVSDFGMARLMSAMDTHLS--VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGD---NNLVGWV-KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACAC-LDDRHWKRPTMIQVMAMFKEI 1163          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.494e-22
Identity = 64/144 (44.44%), Postives = 92/144 (63.89%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK--GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            E ++SDFG+ARLM+ +DTHLS  V+   G  GYV PEY ++   + KGDVYS+G VLLEL+TG++PT+ A   +    NLV W+ +L + G++ D  D+ L+ +   ++ EL Q LKVAC C L     +RPTM +V    + I
Sbjct: 1027 EARVSDFGMARLMSAMDTHLS--VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGD---NNLVGWV-KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACAC-LDDRHWKRPTMIQVMAMFKEI 1163          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.548e-22
Identity = 69/170 (40.59%), Postives = 97/170 (57.06%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEE 512
            FE ++SDFG+ARL++ +DTHLS  V+   G  GYV PEY ++   T KGDVYS+G +LLEL++G++P +  +  E    NLV W  QL    +  + +D  LV  K  D ELF +LK+A  C L   P +RPTM    Q +    E    T EDE +      +  ++EE
Sbjct:  999 FEARVSDFGMARLVSALDTHLS--VSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGE--DNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQC-LDDRPFKRPTMI---QLMAMFKEMKADTEEDESLDEFSLKETPLVEE 1160          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
Y5838_ARATH1.128e-7072.32Probably inactive leucine-rich repeat receptor-lik... [more]
Y1719_ARATH1.216e-4052.38Probable inactive receptor kinase At1g27190 OS=Ara... [more]
Y1699_ARATH9.974e-3546.05Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH5.861e-2745.45Leucine-rich repeat receptor protein kinase EXS OS... [more]
PSKR1_ARATH4.200e-2542.86Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
PSKR2_ARATH1.144e-2241.43Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PSKR1_DAUCA1.144e-2241.96Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
BRI1_SOLPE1.494e-2244.44Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC1.494e-2244.44Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRL1_ARATH2.548e-2240.59Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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