CX296267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296267 vs. ExPASy Swiss-Prot
Match: GOT1B_MOUSE (Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.707e-13 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 166 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 441 D+ LLA+GN+ + T++ F R K + FL G+F + + WP++G+I EIYGF LF GF+P V F+ ++PV+G ++ P Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQRHKVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122
BLAST of CX296267 vs. ExPASy Swiss-Prot
Match: GOT1_DICDI (Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 166 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFV-RWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM 447 DR LLALGN+ Q T K F + KG+I F G+ L V RW VG+++EI+GF+ LF +P V L ++P++G I+ +PL+ Sbjct: 29 DRNLLALGNLLLVSGIVLILGLQKTTKFFAQKKKIKGTILFFFGIVVLLVTRWTFVGMVIEIFGFVNLFGDAFPIVISILRKLPIIGNILNHPLV 123
BLAST of CX296267 vs. ExPASy Swiss-Prot
Match: GOT1B_HUMAN (Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 166 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 441 D+ LLA+GN+ + T++ F + K + FL G+F + + WP++G+I EIYGF LF GF+P V F+ ++PV+G ++ P Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122
BLAST of CX296267 vs. ExPASy Swiss-Prot
Match: GOT1B_BOVIN (Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 166 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 441 D+ LLA+GN+ + T++ F + K + FL G+F + + WP++G+I EIYGF LF GF+P V F+ ++PV+G ++ P Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122
BLAST of CX296267 vs. ExPASy Swiss-Prot
Match: GOT1_YEAST (Protein transport protein GOT1 OS=Saccharomyces cerevisiae GN=GOT1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 166 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM--ILDRLKG 468 DR LLALGNI Q T+ FT +GS+ FL+G F + ++W +G I+E G I LF F+ + FL +P++G I+ +P + I+D+L G Sbjct: 30 DRALLALGNILFLIGVFLIIGSQKTYIFFTRPNKRRGSLFFLVGAFLILLKWTFLGFIIESLGIIGLFGDFFGVIVQFLRSMPIIGPILSHPAIAPIVDKLAG 132 The following BLAST results are available for this feature:
BLAST of CX296267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296267 ID=CX296267; Name=CX296267; organism=Citrus clementina; type=EST; length=734bpback to top |