CX297495

Overview
NameCX297495
Unique NameCX297495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX297495 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18
Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 3 
Query:   15 GGNHHASS-NQHLSEDDMDKKIRELNNELNFASRKCEVYRANLLSVLKDIEDHKLQLSIKVQNIKISMKDSL 227
            GG H      Q   ED+MDKKI +L NEL  A+RKCE YR NLLSVLK++ED KLQ+SIKVQNIKIS+KD+L
Sbjct:  717 GGKHQQEVLAQPEPEDEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLKDNL 788
The following BLAST results are available for this feature:
BLAST of CX297495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FRS5_ARATH5.371e-1865.28Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionC06002B02SK RindPdig24 Citrus clementina cDNA clone C06002B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297495 ID=CX297495; Name=CX297495; organism=Citrus clementina; type=EST; length=697bp
AATTCGGCACGAGGGGTGGGAATCATCATGCAAGCTCCAACCAGCATTTG
TCTGAGGATGATATGGACAAAAAAATTCGAGAACTTAACAATGAGCTGAA
CTTTGCAAGTCGAAAGTGTGAAGTTTATCGGGCTAATCTTCTTTCAGTTT
TAAAAGATATTGAAGACCATAAACTACAGTTGTCAATCAAAGTGCAAAAC
ATAAAAATTAGTATGAAGGACAGTCTCTAAAGAGATAATGCCATATGGGG
AGCTCTCTGACGCAACTATAGATAAAATGCAGCATCAACAAAAATTTTAG
CAATCTCCGCATATTGGACTTAACCAGTGGCTTTATTCCAGATCGTGGGC
AAAGAGATAAATATTTCATCAGGGCTGAAGTTGAAAGTGTTTGCCAGATG
CTTAATCCCTGCCAAATAATGGAGATTTATCTTTCAATTAAGCATGTTAT
ATGGGAGATTAACCACAGCTTAGATTGGTACAGTGCAGTTGAATTGGGCA
TGTTAAGCCAGGTGTAATTTGATTGTGGATCCTTGTTAGGATGTATATTG
TAGAAGAAGATCCTGTTTAGGCACACTCGAGAGTCTATTTCTTTCATTGC
TTAGTGCTTACTTGGGTTGTAAAATAATTTTTTATTTTAGCCTTTTCATA
GGTTCGAAGTTACTGGTTCAGCTCCGATTACACAGAGTTGGCATCAT
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