CX299693

Overview
NameCX299693
Unique NameCX299693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299693 vs. ExPASy Swiss-Prot
Match: MFP1_TOBAC (MAR-binding filament-like protein 1-1 OS=Nicotiana tabacum GN=MFP1-1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.030e-48
Identity = 99/202 (49.01%), Postives = 140/202 (69.31%), Query Frame = 3
Query:    3 EACENRATIAKFTQEKDDLRKMLDNELGNVKNLKYXXXXXXXXXXXXRNEASDLEKQLKQSKDSCADLETEISRIRAEFAEVKHTLGNSLDEAKRSGEVLAGELFAAKEVLKKASEELQNVSHELEATAENRDSLRKELVNVYKKAEATANDLKEQKEIVSSLNKELQALEKQTSKDKEARKSLETDLEEATKSLDEMNRNA 608
            E  +N   IA  TQEK++LR+MLD EL N+  LK             R++ASD+ +QL+QS+  C+ LE E+S+++ E  E + +L  ++DE KR  E+LA EL   +E+LKK +EE+  +SHEL A  EN D+L+ ELV+VYKKAE  A++LK++K IV +L KEL  LE Q +++KE+RK+LE +LE AT+SLDEMNRNA
Sbjct:  395 EVRKNNVLIADLTQEKENLRRMLDAELENISKLKLEVQVTQETLEKSRSDASDIAQQLQQSRHLCSKLEAEVSKLQMELEETRTSLRRNIDETKRGAELLAAELTTTRELLKKTNEEMHTMSHELAAVTENCDNLQTELVDVYKKAERAADELKQEKNIVVTLEKELTFLEAQITREKESRKNLEEELERATESLDEMNRNA 596          
BLAST of CX299693 vs. ExPASy Swiss-Prot
Match: MFP1_SOLLC (MAR-binding filament-like protein 1 OS=Solanum lycopersicum GN=MFP1 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.724e-48
Identity = 100/203 (49.26%), Postives = 139/203 (68.47%), Query Frame = 3
Query:    3 EACENRATIAKFTQEKDDLRKMLDNELGNVKNLKYXXXXXXXXXXXXRNEASDLEKQLKQSKDSCADLETEISRIRAEFAEVKHTLGNSLDEAKRSGEVLAGELFAAKEVLKKASEELQNVSHELEATAENRDSLRKELVNVYKKAEATANDLKEQKEIVSSLNKELQALEKQTSKDKEARKSLETDLEEATKSLDEMNRNAL 611
            EA +N   IA  T+EK++LR+M+D EL NV  LK             R+E SD+  QL+Q +D  + LE E+S+++ E  E + +L  ++DE K S E+LA EL   KE+LKK +EE+  +S EL A +ENRDSL+ ELVNVYKK E T N+LK++K IV +L +EL+ LE Q +++KE RKSLE +LE+AT+SLDE+NRN L
Sbjct:  387 EASKNEVLIADLTREKENLRRMVDAELDNVNKLKQEIEVTQESLENSRSEVSDITVQLEQLRDLSSKLEREVSKLQMELEETRASLQRNIDETKHSSELLAAELTTTKELLKKTNEEMHTMSDELVAVSENRDSLQTELVNVYKKREHTRNELKQEKTIVRTLEEELKFLESQITREKELRKSLEDELEKATESLDEINRNVL 589          
BLAST of CX299693 vs. ExPASy Swiss-Prot
Match: MFP1_ARATH (MAR-binding filament-like protein 1 OS=Arabidopsis thaliana GN=MFP1 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.925e-40
Identity = 83/198 (41.92%), Postives = 129/198 (65.15%), Query Frame = 3
Query:   12 ENRATIAKFTQEKDDLRKMLDNELGNVKNLKYXXXXXXXXXXXXRNEASDLEKQLKQSKDSCADLETEISRIRAEFAEVKHTLGNSLDEAKRSGEVLAGELFAAKEVLKKASEELQNVSHELEATAENRDSLRKELVNVYKKAEATANDLKEQKEIVSSLNKELQALEKQTSKDKEARKSLETDLEEATKSLDEMNRN 605
            +++  +A  T++ +D ++MLD EL  VKNL++            R+  SDLE  L +S+  C+ LE+E++ +  E+ E K     +LD  K+  E+ A EL   K++ ++  +EL+ V+HEL+ ++    SL+KELV +YKK E +  +L+E+K+ V SLNKE++ +EKQ   ++EARKSLETDLEEA KSLDEMN+N
Sbjct:  410 KSKDKVADLTEKYEDSKRMLDIELTTVKNLRHELEGTKKTLQASRDRVSDLETMLDESRALCSKLESELAIVHEEWKEAKERYERNLDAEKQKNEISASELALEKDLRRRVKDELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSLNKEVKGMEKQILMEREARKSLETDLEEAVKSLDEMNKN 607          
The following BLAST results are available for this feature:
BLAST of CX299693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MFP1_TOBAC1.030e-4849.01MAR-binding filament-like protein 1-1 OS=Nicotiana... [more]
MFP1_SOLLC8.724e-4849.26MAR-binding filament-like protein 1 OS=Solanum lyc... [more]
MFP1_ARATH3.925e-4041.92MAR-binding filament-like protein 1 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionC07001C03SK NTLeaf1 Citrus clementina cDNA clone C07001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299693 ID=CX299693; Name=CX299693; organism=Citrus clementina; type=EST; length=613bp
ATGAAGCTTGTGAAAATCGAGCAACCATTGCTAAGTTCACCCAAGAAAAG
GATGACTTGAGGAAAATGCTGGATAACGAATTGGGCAATGTAAAGAATCT
GAAATATGAACTTCAAATTACTCAGGAAACTCTTGAGACGACAAGGAATG
AGGCTTCTGATCTGGAAAAGCAACTAAAGCAATCGAAAGATTCGTGTGCA
GATCTTGAGACTGAAATTTCTAGAATTCGGGCTGAATTTGCTGAAGTTAA
GCATACCTTGGGAAACAGCCTTGATGAGGCAAAAAGAAGTGGTGAAGTGC
TAGCCGGCGAGCTCTTTGCAGCAAAGGAAGTTCTGAAGAAAGCTAGCGAG
GAGCTGCAAAATGTGTCCCATGAACTGGAAGCTACAGCAGAAAATCGTGA
TAGCCTACGAAAGGAATTGGTAAATGTCTATAAGAAAGCAGAAGCTACGG
CCAATGATTTAAAAGAACAAAAAGAGATAGTTTCTTCTTTGAACAAAGAG
CTACAAGCTTTGGAGAAGCAAACCTCCAAGGACAAGGAGGCGCGCAAGTC
CCTGGAAACAGACTTGGAAGAGGCTACCAAATCACTCGATGAGATGAACC
GAAATGCATTGGA
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