CX299695

Overview
NameCX299695
Unique NameCX299695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 3.973e-67
Identity = 133/184 (72.28%), Postives = 144/184 (78.26%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552
            GLAVMI+ILSTGHISGAHLNPSLTIAFAALRHFPW                  FALKGVFHPFMSGGVT+PSV+ GQAFALEF+ITF LLF            GELAGIAVGATVMLNILVAGPS+G SMNPVRTLGPAVA+GNY+SLW+YLVAPTLGA++GAAVYT VKL  D  T+ PR VR
Sbjct:  118 GLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWAHVPAYIAAQVSASICASFALKGVFHPFMSGGVTIPSVSLGQAFALEFIITFILLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLGAISGAAVYTGVKL-NDSVTDPPRPVR 300          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 2.256e-62
Identity = 125/186 (67.20%), Postives = 139/186 (74.73%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVP--SVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552
            GLAV  +ILSTGHISGAHLNPSLTIAFAALRHFPW                  FALKGVFHPF+SGGVTVP  +++T QAF  EF+ITFNLLF            GELAGIAVGA V LNIL+AGP++G SMNPVRTLGPAVAAGNY+ LWIYL+APTLGA+AGA VYT VKLR D++ ETPR  R
Sbjct:  123 GLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVFHPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVYTAVKLR-DENGETPRPQR 307          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 8.573e-62
Identity = 127/186 (68.28%), Postives = 139/186 (74.73%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVP--SVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552
            GLAV  VILSTGHISGAHLNPSLTIAFAALRHFPW                  FALKGVFHPF+SGGVTVP  +V+T QAF  EF+I+FNLLF            GELAGIAVGA V LNILVAGP++G SMNPVRTLGPAVAAGNY+ LWIYL+APTLGALAGA+VY  VKLR D++ ETPR  R
Sbjct:  114 GLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVFHPFLSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLLAPTLGALAGASVYKAVKLR-DENGETPRTQR 298          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 8.872e-59
Identity = 116/184 (63.04%), Postives = 135/184 (73.37%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552
            GLAVMIVILSTGHISGAHLNP++TIAFAAL+HFPW                  FALK VF P MSGGVTVP+V   QAFALEF+I+FNL+F            GELAGIAVGATVMLNIL+AGP++ ASMNPVRTLGPA+AA NY+++W+YL AP LGAL GA  YT+VKL  +D  E P++ R
Sbjct:  120 GLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFEPTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEED--EAPKERR 301          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP33_ORYSJ (Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.423e-40
Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL 513
            GLAV +++LS  HISG HLNP+++IA A   H P                   FA+KG++HP   G VTVP+V T +AF +EF+ITF LLF             EL  +AVGATVM+NILVAGPS+GASMNP RT+G A+A G Y  +W+YLVA  LGA+AG   Y  +KL
Sbjct:  108 GLAVTVLVLSLIHISGCHLNPAISIAMAVFGHLPSAHLLPYISSQILGAVAASFAVKGLYHPVNPGIVTVPNVGTVEAFFVEFIITFFLLFIITALATDPNAVKELIAVAVGATVMMNILVAGPSTGASMNPARTIGAAIATGRYTQIWVYLVATPLGAIAGTGAYVAIKL 278          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.684e-39
Identity = 84/171 (49.12%), Postives = 104/171 (60.82%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL 513
            GLAV +++LS  HISG HLNP+++IA     H P                   FA+KG++HP   G VTVP V T +AF LEF+ TF LLF             EL  +AVGAT+M+N LVAGPS+GASMNP RTLGPA+A G Y  +W+YLVA  LGA+AG   Y  +KL
Sbjct:  135 GLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGMYHPVNPGIVTVPKVGTVEAFFLEFVTTFVLLFIITALATDPNAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGRYTQIWVYLVATPLGAVAGEGFYFAIKL 305          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.127e-37
Identity = 78/173 (45.09%), Postives = 108/173 (62.43%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVF---HPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510
            GLAVM+++ + GHISGAH NP++T+AFA  R FPW                    L+ +F   H    G  T+P+ +  Q+  LEF+ITF L+F            GELAG+AVGAT++LN+L+AGP SGASMNP R+LGPA+  G Y+S+W+Y+V P  GA+AGA  Y +++
Sbjct:   88 GLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPG--TLPAGSDVQSLVLEFIITFYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIR 258          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.285e-37
Identity = 75/170 (44.12%), Postives = 99/170 (58.24%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510
            GL V ++I +TGHISGAH+NP++T++FA  RHFPW                  F LK V HP    G T PS     A  +E ++TFN++F            GELAG+AVG+ V +  + AGP SG SMNP RTL PAVA+  +  LWIY + P +G L+GA VYT ++
Sbjct:   92 GLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTYIR 261          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 5.596e-37
Identity = 79/176 (44.89%), Postives = 105/176 (59.66%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGV------TVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510
            GLAVM+++ S GHISGAHLNP++T+AFA    FPW                   AL+ +F     GG       T P+ +  Q+ A+EF+ITF L+F            GELAG+AVGATV++N+L AGP SGASMNP RT+GPA+  G Y  +W+Y+  P  GA+AGA  Y L++
Sbjct:   94 GLAVMVMVYSVGHISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALF-----GGAPEHFFGTAPAGSDVQSLAMEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTGIWVYIAGPVFGAVAGAWAYNLIR 264          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.545e-37
Identity = 76/180 (42.22%), Postives = 101/180 (56.11%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETP 540
            GL V ++I +TGHISGAH+NP++T++FA  RHFPW                  F LK V  P    G T PS     A A+E ++TFN++F            GELAG+AVG+ V +  + AGP SG SMNP RTL PAVA+  +  LWIY + P +G L+GA VYT ++     +   P
Sbjct:   95 GLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVVGTLSGAWVYTYIRFEEAPAAAKP 274          
The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
NIP51_ARATH3.973e-6772.28Probable aquaporin NIP5-1 OS=Arabidopsis thaliana ... [more]
NIP31_ORYSJ2.256e-6267.20Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica G... [more]
NIP31_MAIZE8.573e-6268.28Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1[more]
NIP61_ARATH8.872e-5963.04Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]
NIP33_ORYSJ1.423e-4049.71Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica G... [more]
NIP32_ORYSJ2.684e-3949.12Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]
NIP11_ORYSJ1.127e-3745.09Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
NIP22_MAIZE4.285e-3744.12Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
NIP13_ORYSJ5.596e-3744.89Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica G... [more]
NIP23_MAIZE9.545e-3742.22Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC07001C05SK NTLeaf1 Citrus clementina cDNA clone C07001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bp
GGGCTGGCCGTTATGATCGTGATTCTGTCAACAGGCCATATTTCTGGAGC
ACATCTTAATCCGTCGCTCACCATCGCATTTGCAGCACTTCGTCACTTTC
CGTGGGTTCAAGTGCCGGCCTATGTTGCAGCGCAGGTTTCAGCATCCGTT
TGTGCTTCTTTTGCTCTCAAGGGTGTTTTTCATCCTTTCATGTCTGGTGG
CGTTACTGTTCCTTCCGTAAACACTGGCCAGGCTTTTGCTCTCGAATTCC
TCATCACATTCAATCTCCTTTTTGTTGTCACTGCTGTTGCTACCGACACC
CGCGCGGTGGGAGAGTTGGCGGGCATTGCAGTTGGAGCTACAGTCATGCT
CAATATTCTAGTGGCGGGGCCATCAAGTGGTGCTTCCATGAATCCAGTAA
GAACTTTGGGACCAGCCGTTGCAGCAGGAAATTACAAGTCATTGTGGATA
TACTTAGTGGCTCCAACTCTGGGGGCTCTTGCAGGGGCAGCTGTTTATAC
GCTCGTCAAACTTCGAGGGGATGATAGTACTGAGACACCACGCCAGGTTA
GG
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