CX299695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 3.973e-67 Identity = 133/184 (72.28%), Postives = 144/184 (78.26%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552 GLAVMI+ILSTGHISGAHLNPSLTIAFAALRHFPW FALKGVFHPFMSGGVT+PSV+ GQAFALEF+ITF LLF GELAGIAVGATVMLNILVAGPS+G SMNPVRTLGPAVA+GNY+SLW+YLVAPTLGA++GAAVYT VKL D T+ PR VR Sbjct: 118 GLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWAHVPAYIAAQVSASICASFALKGVFHPFMSGGVTIPSVSLGQAFALEFIITFILLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLGAISGAAVYTGVKL-NDSVTDPPRPVR 300
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 2.256e-62 Identity = 125/186 (67.20%), Postives = 139/186 (74.73%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVP--SVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552 GLAV +ILSTGHISGAHLNPSLTIAFAALRHFPW FALKGVFHPF+SGGVTVP +++T QAF EF+ITFNLLF GELAGIAVGA V LNIL+AGP++G SMNPVRTLGPAVAAGNY+ LWIYL+APTLGA+AGA VYT VKLR D++ ETPR R Sbjct: 123 GLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVFHPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVYTAVKLR-DENGETPRPQR 307
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 8.573e-62 Identity = 127/186 (68.28%), Postives = 139/186 (74.73%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVP--SVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552 GLAV VILSTGHISGAHLNPSLTIAFAALRHFPW FALKGVFHPF+SGGVTVP +V+T QAF EF+I+FNLLF GELAGIAVGA V LNILVAGP++G SMNPVRTLGPAVAAGNY+ LWIYL+APTLGALAGA+VY VKLR D++ ETPR R Sbjct: 114 GLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVFHPFLSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLLAPTLGALAGASVYKAVKLR-DENGETPRTQR 298
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 8.872e-59 Identity = 116/184 (63.04%), Postives = 135/184 (73.37%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552 GLAVMIVILSTGHISGAHLNP++TIAFAAL+HFPW FALK VF P MSGGVTVP+V QAFALEF+I+FNL+F GELAGIAVGATVMLNIL+AGP++ ASMNPVRTLGPA+AA NY+++W+YL AP LGAL GA YT+VKL +D E P++ R Sbjct: 120 GLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFEPTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEED--EAPKERR 301
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP33_ORYSJ (Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.423e-40 Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL 513 GLAV +++LS HISG HLNP+++IA A H P FA+KG++HP G VTVP+V T +AF +EF+ITF LLF EL +AVGATVM+NILVAGPS+GASMNP RT+G A+A G Y +W+YLVA LGA+AG Y +KL Sbjct: 108 GLAVTVLVLSLIHISGCHLNPAISIAMAVFGHLPSAHLLPYISSQILGAVAASFAVKGLYHPVNPGIVTVPNVGTVEAFFVEFIITFFLLFIITALATDPNAVKELIAVAVGATVMMNILVAGPSTGASMNPARTIGAAIATGRYTQIWVYLVATPLGAIAGTGAYVAIKL 278
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.684e-39 Identity = 84/171 (49.12%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL 513 GLAV +++LS HISG HLNP+++IA H P FA+KG++HP G VTVP V T +AF LEF+ TF LLF EL +AVGAT+M+N LVAGPS+GASMNP RTLGPA+A G Y +W+YLVA LGA+AG Y +KL Sbjct: 135 GLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGMYHPVNPGIVTVPKVGTVEAFFLEFVTTFVLLFIITALATDPNAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGRYTQIWVYLVATPLGAVAGEGFYFAIKL 305
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.127e-37 Identity = 78/173 (45.09%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVF---HPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510 GLAVM+++ + GHISGAH NP++T+AFA R FPW L+ +F H G T+P+ + Q+ LEF+ITF L+F GELAG+AVGAT++LN+L+AGP SGASMNP R+LGPA+ G Y+S+W+Y+V P GA+AGA Y +++ Sbjct: 88 GLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPG--TLPAGSDVQSLVLEFIITFYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIR 258
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.285e-37 Identity = 75/170 (44.12%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510 GL V ++I +TGHISGAH+NP++T++FA RHFPW F LK V HP G T PS A +E ++TFN++F GELAG+AVG+ V + + AGP SG SMNP RTL PAVA+ + LWIY + P +G L+GA VYT ++ Sbjct: 92 GLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTYIR 261
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 5.596e-37 Identity = 79/176 (44.89%), Postives = 105/176 (59.66%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGV------TVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510 GLAVM+++ S GHISGAHLNP++T+AFA FPW AL+ +F GG T P+ + Q+ A+EF+ITF L+F GELAG+AVGATV++N+L AGP SGASMNP RT+GPA+ G Y +W+Y+ P GA+AGA Y L++ Sbjct: 94 GLAVMVMVYSVGHISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALF-----GGAPEHFFGTAPAGSDVQSLAMEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTGIWVYIAGPVFGAVAGAWAYNLIR 264
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.545e-37 Identity = 76/180 (42.22%), Postives = 101/180 (56.11%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETP 540 GL V ++I +TGHISGAH+NP++T++FA RHFPW F LK V P G T PS A A+E ++TFN++F GELAG+AVG+ V + + AGP SG SMNP RTL PAVA+ + LWIY + P +G L+GA VYT ++ + P Sbjct: 95 GLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVVGTLSGAWVYTYIRFEEAPAAAKP 274 The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bpback to top |