CX299925

Overview
NameCX299925
Unique NameCX299925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.456e-49
Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            I+YFPSRYDPVRHAEM P PP +C GRREKCII KENNFKQPGERYRSWA DRQERFICRWVDALSDPRVTHEIR IWISYWSQA KS+GQKLAS LNVRP+I
Sbjct:  390 INYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.507e-46
Identity = 82/103 (79.61%), Postives = 92/103 (89.32%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSR+DP RHAE +P PP +  G+R+KCII KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIR IW SYWSQA K+LGQK+ASRLNVRP +
Sbjct:  390 VNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.968e-46
Identity = 81/103 (78.64%), Postives = 94/103 (91.26%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSR+DPVRHAE HP PP +  G+R++C+I KENNFKQPGERYR++APDRQERF+CRWVDALSDPRVTHEIR IWISYW+QA KSLGQKLASRLNVRP +
Sbjct:  390 VNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.358e-46
Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYDPVRHAE  P PP IC GRREKC I KENNFKQPGERYRSWAPDRQ+RF  RWVDALSDPRVTHEIR +WISYWSQA +SLGQK+AS L+ RPNI
Sbjct:  390 VNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 4.385e-46
Identity = 81/103 (78.64%), Postives = 94/103 (91.26%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYD VRHAE +PTPP +C G+RE+CII KENNFK+PGERYR++ P+RQERFI RW+DALSDPR+THEIR IWISYWSQA KSLGQKLASRLNVRP+I
Sbjct:  390 VNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.666e-45
Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            IDYFPSRYD VRHAE++P P  +C G+REKCII KENNFKQPGERYRS+ PDRQERFI RWV+ALSDPR+T+EIR IWI+YWSQA KSLGQKLASRLNVRP+I
Sbjct:  390 IDYFPSRYDQVRHAEVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.666e-45
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            IDYFPSRYDPVRHAE +P P  +C G+REKC+I KENNFKQPGERYRS+ PDRQERFI RWV+ LSDPR+T+EIR IWISYWSQA KSLGQKLASRLNVRP+I
Sbjct:  383 IDYFPSRYDPVRHAEKYPIPSTMCTGKREKCVIQKENNFKQPGERYRSFTPDRQERFIRRWVETLSDPRITYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 485          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.176e-45
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYDPVRHAE HP P  +  G+REKCII KENNFKQPGERYRS++ DRQERFI RW+DALSDPRVTHEIR IWISYWSQA KSLGQK+ASRLNVRP+I
Sbjct:  390 VNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.842e-45
Identity = 80/103 (77.67%), Postives = 91/103 (88.35%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSR+DP RHAE +P PP +C G+RE+CII KENNFK+PGERYRSW PDRQERF+ RWVDALSD RVTHEIR IWISYWSQA +SLGQKLAS LNVRP+I
Sbjct:  390 VNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.712e-45
Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYDPVRHAE  P PP I GG+REKC+I KENNFKQPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  390 VNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
The following BLAST results are available for this feature:
BLAST of CX299925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA1_GOSHI1.456e-4987.38Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA3_NICPL1.507e-4679.61Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA_SOLAP1.968e-4678.64Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA4_SOYBN3.358e-4680.58Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA2_ARATH4.385e-4678.64Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA2_SOLLC1.666e-4580.58Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA1_NICPL1.666e-4580.58Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_GOSHI2.176e-4580.58Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_CUCPE2.842e-4577.67Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA1_SOYBN3.712e-4578.64Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC07004A12SK SaltLeaf1 Citrus clementina cDNA clone C07004A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299925 ID=CX299925; Name=CX299925; organism=Citrus clementina; type=EST; length=522bp
AGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGATG
CATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATAAT
TCCAAAGGAAAACAACTTCAAACAACCTGGAGAGAGATACCGATCTTGGG
CACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTATCT
GATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGGTC
TCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGTGA
GGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTTAG
CAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCGTT
TTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCTGT
AATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTGTACGCTCAAA
ATTTGTATAAAGTACAATCATA
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