CX299932

Overview
NameCX299932
Unique NameCX299932
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length637
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299932 vs. ExPASy Swiss-Prot
Match: ALA4_ARATH (Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.976e-38
Identity = 73/128 (57.03%), Postives = 102/128 (79.69%), Query Frame = 1
Query:    1 VFLLLFGMTSPSTSGYAHHILVEALAPAPMFWLATIVVTVACNLLYFTYVAYQRCFKPMDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFTARVEAKMRQLKVRLHRKTSSL---ALQNVLSP 375
            +F+ L+GM  PS SG  + ILVE LAPAP++W+AT +VTV   L YF ++++QR   P+DHH+IQEIKYYK+DVEDR MWTRER+KAR++TKIGFTARV+AK+R L+ +L++K S++   + Q+ +SP
Sbjct: 1086 LFVALYGMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLHPLDHHIIQEIKYYKRDVEDRRMWTRERTKAREKTKIGFTARVDAKIRHLRSKLNKKQSNMSQFSTQDTMSP 1213          
BLAST of CX299932 vs. ExPASy Swiss-Prot
Match: ALA7_ARATH (Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.847e-35
Identity = 70/124 (56.45%), Postives = 93/124 (75.00%), Query Frame = 1
Query:    1 VFLLLFGMTSPSTSGYAHHILVEALAPAPMFWLATIVVTVACNLLYFTYVAYQRCFKPMDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFTARVEAKMRQLKVRLHRKTSSLALQNVLS 372
            +FL LFGM  P  SG   H+L E LAPAP+FWL +++V  A  L Y  Y+++QR   P+DHH+IQEIK+++ DV+D  MWTRERSKAR++TKIG TARV+AK+RQL+ RL RK S L++ + LS
Sbjct: 1109 IFLALFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLNPLDHHIIQEIKHFRIDVQDECMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQRKHSILSVMSGLS 1232          
BLAST of CX299932 vs. ExPASy Swiss-Prot
Match: ALA5_ARATH (Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.374e-35
Identity = 68/128 (53.12%), Postives = 99/128 (77.34%), Query Frame = 1
Query:    1 VFLLLFGMTSPSTSGYAHHILVEALAPAPMFWLATIVVTVACNLLYFTYVAYQRCFKPMDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFTARVEAKMRQLKVRLHRKTSSL---ALQNVLSP 375
            +F+ ++ M  PS SG  + IL E LAPAP++W+AT++VTVA  L Y  ++A+QR   P+DHH+IQEIKYY +D+ED  +WTRER+KAR++TKIGFTARV+AK+R L+ +L++K S+L   + Q+ +SP
Sbjct: 1098 LFVAIYSMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLNPLDHHIIQEIKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHLRSKLNKKQSNLSHFSAQDAMSP 1225          
BLAST of CX299932 vs. ExPASy Swiss-Prot
Match: ALA6_ARATH (Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.550e-34
Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 1
Query:    1 VFLLLFGMTSPSTSGYAHHILVEALAPAPMFWLATIVVTVACNLLYFTYVAYQRCFKPMDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFTARVEAKMRQLKVRLHRKTSSLALQN 363
            VFL L+GM     SG   H+LVE LAPAP+FWL +++V  A  L Y  +++YQR   P+DHH+IQEIK+++ DVED  MW RE+SKAR++TKIGFTARV+AK+RQL+ RL RK S L++ +
Sbjct: 1107 VFLALYGMLPVKLSGNIFHMLVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRIDVEDERMWKREKSKAREKTKIGFTARVDAKIRQLRGRLQRKHSVLSVMS 1227          
BLAST of CX299932 vs. ExPASy Swiss-Prot
Match: ALA10_ARATH (Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.197e-12
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 1
Query:    1 VFLLLFGMTSPSTSGYAHHILVEALAPAPMFWLATIVVTVACNLLYFTYVAYQRCFKPMDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFTARVEAKMRQLKVRLH 333
            +FL+++G  +PS S  A+ + +EALAPAP +WL T+ V +   + YF Y + Q  F P  H +IQ I+ Y+    D       R ++ + T +G+TAR  A +R+   R H
Sbjct: 1084 IFLMIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFFPKYHQMIQWIR-YEGHSNDPEFVEMVRQRSIRPTTVGYTARRAASVRR-SARFH 1192          
BLAST of CX299932 vs. ExPASy Swiss-Prot
Match: ALA9_ARATH (Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 1
Query:    4 FLLLFGMTSPSTSGYAHHILVEALAPAPMFWLATIVVTVACNLLYFTYVAYQRCFKPMDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFTARVEAKMRQLKV 324
            F+ ++G      S  A+ + VEALAP+  +WL T+ V VA  + YF Y A Q  F PM H +IQ ++ Y+    D       R ++ + T +GFTAR+EAK R +++
Sbjct: 1090 FITVYGELPSRISTGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMIQWLR-YEGQCNDPEYCDIVRQRSIRPTTVGFTARLEAKKRSVRI 1195          
BLAST of CX299932 vs. ExPASy Swiss-Prot
Match: ALA11_ARATH (Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 37/105 (35.24%), Postives = 60/105 (57.14%), Query Frame = 1
Query:    1 VFLLLFGMTSPSTSGYAHHILVEALAPAPMFWLATIVVTVACNLLYFTYVAYQRCFKPMDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFTARVEAKMRQ 315
            +FL+++G  +PS S  A+ + +EALAPAP +WL T+ V     + +F + + Q  F P  H +IQ I+ Y+    D       R ++ + T +GFTAR  A +R+
Sbjct: 1085 IFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQWIR-YEGHSNDPEFVEMVRQRSIRPTTVGFTARRAASVRR 1188          
The following BLAST results are available for this feature:
BLAST of CX299932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ALA4_ARATH3.976e-3857.03Putative phospholipid-transporting ATPase 4 OS=Ara... [more]
ALA7_ARATH1.847e-3556.45Putative phospholipid-transporting ATPase 7 OS=Ara... [more]
ALA5_ARATH5.374e-3553.13Putative phospholipid-transporting ATPase 5 OS=Ara... [more]
ALA6_ARATH4.550e-3456.20Phospholipid-transporting ATPase 6 OS=Arabidopsis ... [more]
ALA10_ARATH2.197e-1236.04Phospholipid-transporting ATPase 10 OS=Arabidopsis... [more]
ALA9_ARATH2.870e-1237.38Putative phospholipid-transporting ATPase 9 OS=Ara... [more]
ALA11_ARATH2.429e-1135.24Putative phospholipid-transporting ATPase 11 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionC07004B08SK SaltLeaf1 Citrus clementina cDNA clone C07004B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299932 ID=CX299932; Name=CX299932; organism=Citrus clementina; type=EST; length=637bp
GTGTTTCTCTTACTTTTTGGAATGACGTCTCCCTCTACATCTGGGTATGC
TCACCATATTCTCGTTGAAGCCCTTGCTCCTGCACCGATGTTTTGGTTAG
CCACCATAGTGGTAACTGTTGCTTGTAATCTCCTTTACTTCACCTACGTA
GCCTATCAAAGATGTTTCAAACCCATGGATCATCATGTTATTCAAGAAAT
CAAGTACTACAAGAAAGATGTTGAGGATCGACACATGTGGACCAGGGAAA
GATCGAAGGCGAGGCAAGAAACCAAGATTGGGTTCACAGCAAGGGTGGAA
GCAAAAATGAGACAGTTGAAAGTAAGATTACATAGGAAGACCTCCTCTTT
AGCTTTGCAAAATGTATTGTCCCCATCATAACAATGCCTATGATTTTTCA
GTTTCCTTTAGTAAAAGTCTCTAGGGTTTTTGGCCGTTTACAGTTTTACC
TCGCCGCCCCTCTCCAATTCATTTTCTTAATATTGTTTATTATCTGTTCA
CGCGGGGTTGGTCAAAGCTTATGCATTGCACAACAAAAGGCCATGGAGCT
GATGTCTTTGTATGTAAGTGTAACACTATTTATATTGACTGATGAGATAG
TTACACCTTGTGAAGAGAAAAAAAAAAAAAAAAAAAA
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