CX308554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.999e-21 Identity = 64/148 (43.24%), Postives = 83/148 (56.08%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQETRPPRNSMQVCDDKKKIEEYVASLTKDPSFTIAVADAVASSINGPPH 444 GQKVT+DNPSPRAYF+C+ A S C VKKKVQR +ED+S LVATYEGEHNH + S + ++ L + S S S VT + + S + T P K +E+ +SLTKDP+FT A+A AV + H Sbjct: 155 GQKVTRDNPSPRAYFKCACAPS-CSVKKKVQRSVEDQSVLVATYEGEHNHPMP-SQIDSNNGLNRHISHGGSASTPVAANRRSSLTVPVT-TVDMIESKKVTSPTSRIDFPQVQKLLVEQMASSLTKDPNFTAALAAAVTGKLYQQNH 299
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 67/146 (45.89%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQ---ETRPPRNSMQVCDDKKKIEEYVASLTKDPSFTIAVADAVASSI 429 GQKVT+DNPSPRAYFRCS A S CPVKKKVQR ED S LVATYEG HNH LG ++S + T+ S VTLDL ++G ++ E N+MQ + I++ +SLTKD FT A+A A++ + Sbjct: 185 GQKVTRDNPSPRAYFRCSFAPS-CPVKKKVQRSAEDPSLLVATYEGTHNH------LGPNASEGD--------------ATSQGGSSTVTLDL-VNGCHRLALEKNERDNTMQ----EVLIQQMASSLTKDSKFTAALAAAISGRL 304
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.578e-19 Identity = 59/144 (40.97%), Postives = 78/144 (54.17%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQ-ETRPPRNSMQVCDDKKKIEEYVASLTKDPSFTIAVADAVASSI 429 GQK+T+DNPSPRAYFRCS + S C VKKKVQR ED SFLVATYEG HNH +S+ ++ V LDL G E + R ++Q + +++ +SLTKDP FT A+A A++ + Sbjct: 155 GQKITRDNPSPRAYFRCSFSPS-CLVKKKVQRSAEDPSFLVATYEGTHNHTGPHASVSRT----------------------------VKLDLVQGGLEPVEEKKERGTIQ----EVLVQQMASSLTKDPKFTAALATAISGRL 265
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17 Identity = 66/224 (29.46%), Postives = 98/224 (43.75%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLT---------------NYCSPKS----SIVHCPDYQTTDSFGS---DVTLDLTLS-----GSNQET-------------RPPRNSMQVCD------------------------------------DKKKIEEYVASLTKDPSFTIAVADAVASSINGPPH 444 GQK+ K NP PRAY+RC+MA+ GCPV+K+VQRC ED+S L+ TYEG HNH + +++ +S+ T +P + +++ C T S + VTLDLT S GSN + RP + Q+ + + + + +LT DP+FT A+A ++S ING H Sbjct: 321 GQKMAKGNPCPRAYYRCTMAT-GCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMASTTTAAANMLLSGSMSSHDGMMNPTNLLARAVLPCSTSMATISASAPFPTVTLDLTHSPPPPNGSNPSSSAATNNNHNSLMQRPQQQQQQMTNLPPGMLPHVIGQALYNQSKFSGLQFSGGSPSTAAFSQSHAVADTITALTADPNFTAALAAVISSMINGTNH 543
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.864e-17 Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQETRPPRNSMQ 330 GQK+ K NP PRAY+RC++A+S CPV+K+VQRC ED S L++TYEG HNH + S+ +S+ + S S D G L+ +LSG+N +P + +Q Sbjct: 200 GQKIAKGNPCPRAYYRCTIAAS-CPVRKQVQRCSEDMSILISTYEGTHNHPLPMSATAMASATSAAASMLLSGASSSSSAAADLHG----LNFSLSGNNITPKPKTHFLQ 304
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.589e-16 Identity = 64/216 (29.63%), Postives = 90/216 (41.67%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSS-------------------IVHCPDYQTTDSFGS---DVTLDLTLS---------------------GSNQETRP---------------------PRNSMQVCDDK---KKIEEYVASLTKDPSFTIAVADAVASSINGPPHR 447 GQK+ K NP PRAY+RC+MA GCPV+K+VQRC ED+S L+ TYEG HNH + ++ +S+ T S S I+ C T S + +TLDLT S G N P P +Q+ + + A++ DP+F A+A A+ S +NG H+ Sbjct: 306 GQKMAKGNPCPRAYYRCTMAG-GCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAATAMASTTTAAASMLLSGSMSSQDGLMNPTNLLARAILPCSSSMATISASAPFPTITLDLTNSPNGNNPNMTTNNPLMQFAQRPGFNPAVLPQVVGQAMYNNQQQSKFSGLQLPAQPLQIAATSSVAESVSAASAAIASDPNFAAALAAAITSIMNGSSHQ 520
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.208e-15 Identity = 64/202 (31.68%), Postives = 91/202 (45.05%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSL---------------GQSSSLTNY------CSPKSSIVHCPDYQTTDSFGS------DVTLDLT---------------------LSGSNQETRPPRNSMQV---------CDDKKKIEEYVASLTKDPSFTIAVADAVASSING 435 GQK+ K NP PRAY+RC+MA GCPV+K+VQRC ED + L TYEG HNH + S+ G SSS + + SS H Y +T + S +TLDLT L +NQ N+ Q+ ++ ++ A++ DP+FT A+A A+++ I G Sbjct: 248 GQKMAKGNPCPRAYYRCTMAV-GCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPSATAMAATTSAAAAMLLSGSSSSNLHQTLSSPSATSSSSFYHNFPYTSTIATLSASAPFPTITLDLTNPPRPLQPPPQFLSQYGPAAFLPNANQIRSMNNNNQQLLIPNLFGPQAPPREMVDSVRAAIAMDPNFTAALAAAISNIIGG 448
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.208e-15 Identity = 62/206 (30.10%), Postives = 91/206 (44.17%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSS--------------------IVHCPDYQTTDSFGS---DVTLDLTLS--GSNQETRP-----PRNSM-------------------------------QVCDDKKKIEEYVASLTKDPSFTIAVADAVASSING 435 GQK+ K NP PRAY+RC+MA GCPV+K+VQRC ED++ L+ TYEG HNH + +++ +S+ T S S I+ C T S + +TLDLT S G+N P R+ + Q + + + A++ +P+F A+A A+ S ING Sbjct: 301 GQKMAKGNPCPRAYYRCTMAV-GCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTTAAASMLLSGSTMSNQDGLMNPTNLLARTILPCSSSMATISASAPFPTITLDLTESPNGNNPTNNPLMQFSQRSGLVELNQSVLPHMMGQALYYNQQSKFSGLHMPSQPLNAGESVSAATAAIASNPNFAAALAAAITSIING 505
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.919e-15 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTN----YCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQET 306 GQK K NP PRAY+RC++A GCPV+K+VQRC+ED S L+ TYEG HNH + + +S+ + ++ H YQT + S + S N T Sbjct: 244 GQKTAKGNPCPRAYYRCTVAP-GCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASTSPFLLLDSSDNLSHPSYYQTPQAIDSSLITYPQNSSYNNRT 348
BLAST of CX308554 vs. ExPASy Swiss-Prot
Match: WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 1 GQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSS 186 GQK+ K NP PRAY+RC++A GCPV+K+VQRC +D S L+ TYEG H+H + S+ +S+ Sbjct: 236 GQKIAKGNPCPRAYYRCTVAP-GCPVRKQVQRCADDMSILITTYEGTHSHSLPLSATTMAST 296 The following BLAST results are available for this feature:
BLAST of CX308554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308554 ID=CX308554; Name=CX308554; organism=Citrus clementina; type=EST; length=650bpback to top |