CX308578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 7.819e-53 Identity = 100/114 (87.72%), Postives = 108/114 (94.74%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLSAV 342 KDYQSDHKF+ITTYSPTGV ITSSG+KKG+LFLADVNTQLKNKN+TTD+KVDT SNLFTTITVDE APGLKTILSF+VPDQRSGK+E+QYLHDYAGI TSVGLTANPIVN S V Sbjct: 21 KDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGV 134
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 1.630e-50 Identity = 98/114 (85.96%), Postives = 106/114 (92.98%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLSAV 342 KDY SD KFTI+TYSPTGVAITSSGTKKGELFL DVNTQLKNKNITTD+KVDT SNLFTTITV+EPAPG+K ILSFKVP+Q SGKVELQYLH+YAGIS+SVGL ANPIVN S+V Sbjct: 21 KDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSV 134
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 3.075e-49 Identity = 93/114 (81.58%), Postives = 106/114 (92.98%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLSAV 342 +DY SDHKFT+TTYS TGVAIT+SG KKGELFLADV+TQLKNKNITTD+KVDT SN++TTITVDEPAPGLKTI SF VPDQ+SGKVELQYLH+YAGI+TS+GLTA+P+VN S V Sbjct: 21 RDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGV 134
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 5.812e-40 Identity = 74/114 (64.91%), Postives = 96/114 (84.21%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLSAV 342 +DYQ+DHKFT+TTY+ GVAIT++ TKK +L ++ +Q+KNKNIT D+K ++ SN+ TT+TVDE PGLK+ILSF VPDQRSGK ELQY HDYAG+S S+GLTA+P+VNLS+V Sbjct: 20 RDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSV 133
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 7.591e-40 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLSAV 342 +DYQ D KF++TTYS TGVAIT++GT KG LFL DV TQ+KN N T D+KV T S+L TT+T DEPAPGLK I+ K+PD +SGK E+QY HDYAGISTSVG TA PIVN S V Sbjct: 21 RDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGV 134
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.914e-40 Identity = 76/113 (67.26%), Postives = 97/113 (85.84%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLS 336 +DYQ+DHKFT+TTY+ G AIT++ TKK +L + ++ +Q+KNKNIT D+K ++ASN+ TTIT D+ APGLKTILSF VPDQ+SGKVELQYLHDYAGI+ S+GLTANP+VNLS Sbjct: 20 RDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLS 132
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 1.295e-39 Identity = 81/114 (71.05%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLSAV 342 KD+ SD KF+ITT+SP GVAITS+GTKKG+L L DV Q + KNITTDLKV T S T TVDE APGL++I SFKVPDQ SGKVELQYLH+YAGISTS+GLT NP VN S V Sbjct: 21 KDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGV 134
BLAST of CX308578 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.269e-33 Identity = 66/113 (58.41%), Postives = 89/113 (78.76%), Query Frame = 1 Query: 1 KDYQSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNLS 336 KDY + KF +TT SP GVAIT++GT+K E +++TQ+KNK +T D+K ++ S+L TTITVDE PGLK+I++ VPDQRSGK+E QYLH+YAG++ SVGL +NP+VNLS Sbjct: 21 KDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLS 133 The following BLAST results are available for this feature:
BLAST of CX308578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308578 ID=CX308578; Name=CX308578; organism=Citrus clementina; type=EST; length=344bpback to top |