CX308593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308593 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 2.482e-22 Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 12 SMHEFEDESLFTPEAEPEKIQRVHGLQDGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERL 305 S +E E++SLF E + + + ++ GS+S FP K +NSV SIK V+F NKLNLL+PFGPLAI+VH + KGWVF L+L+GITPLAERL Sbjct: 18 SANELENKSLFRQEEDATQTKEASLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERL 115
BLAST of CX308593 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.985e-21 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 15 MHEFEDESLFTPEAEPEKIQRVHGLQDGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERL 305 +++ E +SLF + + + + ++ GS+S F K NSV +S K V+ SNKLNLL+PFGPLAI++H LT +KGW+F LSL+GITPLAERL Sbjct: 19 VNDVEHKSLFRRDTDSPERKAASLMEQGSLSASFRECSTKTPNNSVLQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERL 115
BLAST of CX308593 vs. ExPASy Swiss-Prot
Match: CAX6_ARATH (Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 1.841e-17 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 15 MHEFEDESLFTPEAEPEKIQRVHGLQDGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERL 305 ++E E +SL E + + ++ GS+ K +NSV +S K V+ SNKLNLL+PFGPLAI+VH LT +KGW F LSL+GITPLAERL Sbjct: 34 VNEVELKSLLEQETDSPQTNAASLMEQGSLR----ERRAKAPRNSVVQSFKIVILSNKLNLLLPFGPLAILVHYLTDNKGWFFLLSLVGITPLAERL 126
BLAST of CX308593 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.329e-12 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 87 LQDGSVSGDFPSSGN-KILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERL 305 LQ+G + S N + S RSI+ V+F++KLNLL+PFGP +I++H T G VF S+LGITPLAERL Sbjct: 18 LQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERL 91
BLAST of CX308593 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.156e-11 Identity = 30/50 (60.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 159 SIKTVVFSNKLNLLMPFGPLAIMVHNLT-GHKGWVFFLSLLGITPLAERL 305 S++ V+ K+N+L+PFGPLA+M+H L+ H+GWVF SL+GITPLAERL Sbjct: 63 SVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERL 112 The following BLAST results are available for this feature:
BLAST of CX308593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308593 ID=CX308593; Name=CX308593; organism=Citrus clementina; type=EST; length=305bpback to top |