CX308598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 2.324e-34 Identity = 72/137 (52.55%), Postives = 105/137 (76.64%), Query Frame = 3 Query: 15 TVLWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTNVS-SQVKNPVV-RLLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDLKTGLKRYLSSWESADDPSPGKFTYGLDIQVSPKLCTFNGS 419 T +WVANR++P+S+ L I N NLVLL+ +N ++WSTNV+ ++PVV LLDNGN V++D++S++ ++ +LWQSFDY TDTLLP+MKLG+DLKTGL R+L+SW S+DDPS G ++Y L+++ P+ +GS Sbjct: 82 TYVWVANRDNPLSNDIGTLKISGN-NLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQ-FLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEFYLSSGS 216
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.153e-33 Identity = 73/136 (53.68%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 15 TVLWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTNVS-SQVKNPVV-RLLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDLKTGLKRYLSSWESADDPSPGKFTYGLDIQVSPKLCTFNG 416 T +WVANR++P+S+ L I N NLVLL TN ++WSTN++ + PVV LL NGN V++D+S++ +E YLWQSFDY TDTLLP+MKLG+DLKTGL R+L+SW S+DDPS G F+Y L+ + P+ ++G Sbjct: 82 TYVWVANRDNPLSNAIGTLKISGN-NLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASE-YLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEFYLWHG 215
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.846e-32 Identity = 72/135 (53.33%), Postives = 100/135 (74.07%), Query Frame = 3 Query: 3 KIPD-TVLWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTNVS-SQVKNPVV-RLLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDLKTGLKRYLSSWESADDPSPGKFTYGLDIQVSPK 398 K+ D T +WVANR++P+S+ L I N NLVLL+ +N +W TN++ ++PVV LL NGN V++D+S++ +E YLWQSFDY TDTLLP+MKLG++LKTGL R+L+SW S+DDPS G F+Y L+ Q P+ Sbjct: 76 KVSDRTYVWVANRDNPLSNAIGTLKISGN-NLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASE-YLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPE 208
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.659e-30 Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 3 Query: 15 TVLWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTN-VSSQVKNPVV-RLLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDLKTGLKRYLSSWESADDPSPGKFTYGLDIQVSPKLCTF 410 T +WVANR++P+S L I N NLVLL+ +N ++WSTN ++PVV LL NGN V++D S+ + +LWQSFDY TDTLLP+MKLG+DL+TGL R+L+SW S+DDPS G F+Y L + P+ F Sbjct: 81 TYVWVANRDNPLSCSIGTLKISNM-NLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRD-SNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEFYLF 212
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.329e-26 Identity = 65/141 (46.10%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 3 KIPD-TVLWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTNVS-SQVKNPVVR-LLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDLKTGLKRYLSSWESADDPSPGKFTYGLDIQVSPKLCTFNG 416 K+ D T +WVANR++P+S L I N N L+ +N ++WSTN++ ++PVV +L NGN V++D S+++ +LWQSFD+ TDTLLP+MKL +DLKTGL R+L+S S+DDPS G F+Y L+ + P+ +G Sbjct: 74 KVSDRTYVWVANRDNPLSSSIGTLKISGN-NPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRD-SNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPEFYLSSG 212
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.255e-20 Identity = 53/126 (42.06%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 15 TVLWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTNVSSQVKNPVV-RLLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDL-KTGLKRYLSSWESADDPSPGKFTYGLDIQ 386 T +WVANR++ + + L I ++ +LVLL+ +N +WSTN + PV LL NGN V++D S ++ + ++WQSFDY DTLLP+MKLG +L + ++ L+SW+S DPS G F++ L+ + Sbjct: 86 TYVWVANRDNALHNSMGTLKI-SHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRD-SKTNDLDRFMWQSFDYPVDTLLPEMKLGRNLIGSENEKILTSWKSPTDPSSGDFSFILETE 209
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.557e-20 Identity = 51/126 (40.48%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 15 TVLWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTNVSSQVKNPVV-RLLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDLK-TGLKRYLSSWESADDPSPGKFTYGLDIQ 386 T +WVANR++ + + L I ++ +LVLL+ +N +WSTN + PV LL NGN V++D+ ++ + ++WQSFDY DTLLP+MKLG + +G ++ L+SW+S DPS G +++ L+ + Sbjct: 86 TYVWVANRDNALHNSMGTLKI-SHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTT-ALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETE 209
BLAST of CX308598 vs. ExPASy Swiss-Prot
Match: EP1G_DAUCA (Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.621e-11 Identity = 43/111 (38.74%), Postives = 59/111 (53.15%), Query Frame = 3 Query: 21 LWVANRNSPISDHNAVLTIGNNGNLVLLNQTNGTIWSTNVSSQVKNPV-VRLLDNGNLVIKDNSSSHTTESYLWQSFDYLTDTLLPDMKLGWDLKTGLKRYLSSWESADDP 350 +W ANR +P+ D NA LT G +GNLVL W T+ ++ K V +++L NGN+V+ D+ +LWQSFD TDTLL L T L S E+ + P Sbjct: 91 VWEANRGNPV-DENATLTFGPDGNLVLARSNGQVAWQTSTAN--KGVVGLKILPNGNMVLYDSKG-----KFLWQSFDTPTDTLLVGQSLKMGAVTKLVSRASPGENVNGP 193 The following BLAST results are available for this feature:
BLAST of CX308598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308598 ID=CX308598; Name=CX308598; organism=Citrus clementina; type=EST; length=431bpback to top |