CX308724

Overview
NameCX308724
Unique NameCX308724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX308724 vs. ExPASy Swiss-Prot
Match: SSBP_ARATH (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana GN=At4g11060 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.032e-23
Identity = 50/66 (75.76%), Postives = 61/66 (92.42%), Query Frame = -1 
Query:  246 AYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGTLRLVKSGESISKISFDDLREG 443
            +YAV++L KNSSVYVEGDIE RVYNDSI+ EVK+IPEIC+RRDG +R++K GESISKISFD+L+EG
Sbjct:  134 SYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGESISKISFDELKEG 199
The following BLAST results are available for this feature:
BLAST of CX308724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SSBP_ARATH2.032e-2375.76Single-stranded DNA-binding protein, mitochondrial... [more]
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Properties
Property NameValue
Genbank descriptionC21003B03Rv AbsLeaSub1 Citrus clementina cDNA clone C21003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308724 ID=CX308724; Name=CX308724; organism=Citrus clementina; type=EST; length=446bp
TTTTTTTTTTTTTTTTTTTTTTTTTGGAAATAATCATATTCACGGGCAGA
AATAGTCATATCCATAGAGAGAGGAAAGGACAGACTAAAAGACCAGGTCA
TAACAAAAACTATAAAACCATCAAAGGATCATTTTCTCCAGGCTAGTTAC
AATATCTGTTTCTTACAAAAGTTAGGTTTCAGCTTCTCCCACTTACAAAT
GAATAAGATTTCCGCAACGTGTCTATTGACTTTCAGCTAAAGCGATCCCT
CTCGCAAATCATCAAAGGATATTTTGCTGATGCTTTCCCCAGACTTTACA
AGGCGAAGTGTCCCATCACGACGAATGCATATCTCTGGGATATTCTTTAC
TTCACCATTAATGCTGTCATTATAAACTCTAATTTCAATGTCACCCTCAA
CATAAACTGAAGAGTTTTTGACAAGTTGTTTGACGGCATAAGCCCG
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