CX308747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS73_ARATH (40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 2.453e-38 Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 MF+ + KI+KDK+AEPTE EE VAQALFDLENTNQELKS+LKDLYINQA+ MD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKD Sbjct: 1 MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKAVVIYVPFRLRKAFRKIHPRLVRELEKKFSGKD 92
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS7_ORYSJ (40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 3.204e-38 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 M+T ++KIQKDK EPTEFE+TVAQA FDLEN NQELKSDLKDLYIN A+QMD+ GNRKA+++YVPYRLRKAY+KIH RLVRELEKKFSGKD Sbjct: 1 MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVRELEKKFSGKD 92
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS7_BRAOL (40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.077e-37 Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 MF+ + KI KDK PTEFEE VAQA FDLENTNQELKSDLKDLYINQA+ MD++GNRKA+V+YVP+RLRKA+RKIHSRLVRELEKKFSG D Sbjct: 1 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKAVVIYVPFRLRKAFRKIHSRLVRELEKKFSGND 92
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS72_ARATH (40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.542e-37 Identity = 73/92 (79.35%), Postives = 83/92 (90.22%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 M++ + KI KDK PTEFEE V QALFDLENTNQELKS+LKDLYINQA+QMD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKD Sbjct: 1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKD 92
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS7_AVIMR (40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.626e-37 Identity = 72/92 (78.26%), Postives = 84/92 (91.30%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 M+T +KI KDKDAEPTEFEE VAQALFD ENTNQE+KSDLKDLYIN A+Q+DVSG +KA+V++VPYRLRK++RKIH RLVRELEKKFSGK+ Sbjct: 1 MYTALQKIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKAVVIHVPYRLRKSFRKIHPRLVRELEKKFSGKE 92
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS7_SECCE (40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.891e-37 Identity = 73/92 (79.35%), Postives = 83/92 (90.22%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 M+T +KKIQKDK EP+EFE+TVAQA FDLEN NQELKSD+KDLYIN A QMDV+GNRKA+V++VPYRLRK +RKIH RLVRELEKKFSGKD Sbjct: 1 MYTARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKAVVIHVPYRLRKNFRKIHVRLVRELEKKFSGKD 92
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS7_HORVU (40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34 Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 M+T +KKIQKDK EP+EFE+TVAQA FDLEN NQELKSDLKDLYIN AIQMDV GNRKA+V++VPYRLRK +RKIH RLVRELE + SGKD Sbjct: 1 MYTARKKIQKDKGVEPSEFEDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKAVVIHVPYRLRKPFRKIHVRLVRELE-RVSGKD 91
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS71_ARATH (40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 69/92 (75.00%), Postives = 79/92 (85.87%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKD 367 MF+ + KI K+K E +E +E VAQA FDLENTNQELKS+LKDLY+N A+Q+D+SG RKAIVV VPYRLRKAYRKIH RLVRELEKKFSGKD Sbjct: 1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKAIVVNVPYRLRKAYRKIHVRLVRELEKKFSGKD 92
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS7_DANRE (40S ribosomal protein S7 OS=Danio rerio GN=rps7 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18 Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGK 364 MF+T KI K +P EFE ++QAL +LE N +LK+ L++L+I A +++V G+RKAI+++VP K+++KI RLVRELEKKFSGK Sbjct: 1 MFSTSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELHITAAKEIEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 90
BLAST of CX308747 vs. ExPASy Swiss-Prot
Match: RS7_TAKRU (40S ribosomal protein S7 OS=Takifugu rubripes GN=rps7 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.281e-18 Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 92 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGK 364 MF+T KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G+RKAI+++VP K+++KI RLVRELEKKFSGK Sbjct: 1 MFSTSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 90 The following BLAST results are available for this feature:
BLAST of CX308747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308747 ID=CX308747; Name=CX308747; organism=Citrus clementina; type=EST; length=369bpback to top |